evm.TU.contig_40341.2 (Carica papaya)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 evm.TU.contig_40341.2 T246869_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_40341.2 LOB 42 87

Links

Other LOB family TFs
Other Carica papaya TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.826
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.826
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.826
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.826
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.804
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.804
Pm018585 Prunus mume Pm018585 I 0.804
Bra035698 Brassica rapa Bra035698 N 0.804
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.804
Bra031599 Brassica rapa Bra031599 N 0.783
LBD11 Arabidopsis thaliana AT2G28500 N 0.783
Cla000556 Citrullus lanatus Cla000556 I 0.783
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.783
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.783
Bo5g008590 Brassica oleracea Bo5g008590 N 0.783
MDP0000879799 Malus domestica MDP0000879799 N 0.783
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.783
Bra018675 Brassica rapa Bra018675 N 0.783
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.783
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.761
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.761
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.761
orange1.1g047530m.g Citrus sinensis orange1.1g047530m.g I 0.761
MDP0000151784 Malus domestica MDP0000151784 I 0.761
MDP0000822986 Malus domestica MDP0000822986 I 0.761
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.761
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.761
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.761
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.761
MDP0000123013 Malus domestica MDP0000123013 I 0.761
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.761
Ca_02507 Cicer arietinum Ca_02507 N 0.761
Ca_04287 Cicer arietinum Ca_04287 I 0.761
OB03G23270 Oryza brachyantha OB03G23270 N 0.739
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.739
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.739
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.739
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.739
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.739
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.739
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.739
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.739
F775_02335 Aegilops tauschii F775_02335 N 0.717
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.717
OMERI05G01740 Oryza meridionalis OMERI05G01740 N 0.717