Gorai.012G094200 (Gossypium raimondii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Gorai.012G094200 T247002_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G094200.1 LOB 61 159

Links

Other LOB family TFs
Other Gossypium raimondii TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_043081 Theobroma cacao TCM_043081 I 0.919
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.919
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.919
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.919
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.909
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.909
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.909
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.909
TCM_041094 Theobroma cacao TCM_041094 I 0.899
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.899
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.899
30111.m000703 Ricinus communis 30111.m000703 I 0.899
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.899
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.889
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.889
PK27389.1 Cannabis sativa PK27389.1 I 0.889
PK23777.1 Cannabis sativa PK23777.1 I 0.889
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.889
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.889
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.879
Pm000938 Prunus mume Pm000938 I 0.879
Ca_14605 Cicer arietinum Ca_14605 I 0.879
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.879
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.879
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.879
MDP0000319331 Malus domestica MDP0000319331 I 0.879
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.879
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.879
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.879
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.879
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.879
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.879
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.869
MDP0000218986 Malus domestica MDP0000218986 I 0.869
MDP0000318244 Malus domestica MDP0000318244 I 0.869
Ca_04287 Cicer arietinum Ca_04287 I 0.869
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.869
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.869
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.869
Cla020379 Citrullus lanatus Cla020379 I 0.869
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.859
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.859
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.859
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.859
Cla000556 Citrullus lanatus Cla000556 I 0.859
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.859
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.859
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.859
MDP0000151784 Malus domestica MDP0000151784 I 0.848
Pm018585 Prunus mume Pm018585 I 0.848
MDP0000123013 Malus domestica MDP0000123013 I 0.848
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.848
Bo5g008590 Brassica oleracea Bo5g008590 N 0.848
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.848
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.848
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.848
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.848
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.848
OB05G11740 Oryza brachyantha OB05G11740 I 0.848
Bra018675 Brassica rapa Bra018675 N 0.848
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.848
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.848
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.848
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.838
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.838
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.838
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.838
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.838
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.838
MDP0000879799 Malus domestica MDP0000879799 N 0.838
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.838
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.838
mgf015666m Mimulus guttatus mgf015666m N 0.838
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.838
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.828
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.828
LBD11 Arabidopsis thaliana AT2G28500 N 0.828
Si024430m.g Setaria italica Si024430m.g N 0.828
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.828
MDP0000822986 Malus domestica MDP0000822986 I 0.828
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.828
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.828
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.828
Bra000491 Brassica rapa Bra000491 N 0.828
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.828
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.818
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.818
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.818
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.818
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.818
Bra011942 Brassica rapa Bra011942 N 0.818
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.818
Bo01039s010 Brassica oleracea Bo01039s010 N 0.818
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.818
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.818
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.818
Bo8g112780 Brassica oleracea Bo8g112780 N 0.818
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.818
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.818
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.815
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.811
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.808
Bra035698 Brassica rapa Bra035698 N 0.808
Bo3g040220 Brassica oleracea Bo3g040220 N 0.808
Bra031599 Brassica rapa Bra031599 N 0.808
Bo4g165420 Brassica oleracea Bo4g165420 N 0.808
mgf022524m Mimulus guttatus mgf022524m N 0.808
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.808
Cla005134 Citrullus lanatus Cla005134 N 0.808
OBART05G01640 Oryza barthii OBART05G01640 N 0.808
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.804
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.800
Cla005133 Citrullus lanatus Cla005133 N 0.798
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.798
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.798
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.798
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.798
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.798
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.798
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.789
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.789
OS05G0123000 Oryza sativa OS05G0123000 I 0.789
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.788
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.788
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.788
Ca_02507 Cicer arietinum Ca_02507 N 0.788
OPUNC05G01600 Oryza punctata OPUNC05G01600 N 0.780
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.778
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.778
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.778
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.778
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.778
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.778
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.773
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.768
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.768
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.768
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.768
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.768
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.768
OBART03G13260 Oryza barthii OBART03G13260 N 0.768
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.768
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.768
OS03G0287400 Oryza sativa OS03G0287400 N 0.768
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.768
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.768
PK17019.1 Cannabis sativa PK17019.1 I 0.765
mgf019622m Mimulus guttatus mgf019622m N 0.758
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.758
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.758
OMERI05G01730 Oryza meridionalis OMERI05G01730 N 0.750
OB03G23270 Oryza brachyantha OB03G23270 N 0.747
Si037280m.g Setaria italica Si037280m.g N 0.747
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.747
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.747
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.745
evm.TU.contig_40341.2 Carica papaya evm.TU.contig_40341.2 N 0.739
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.737
F775_02335 Aegilops tauschii F775_02335 N 0.737
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.737
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.737
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.737
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.736
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.731
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.727
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.727
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.727
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.717
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.717
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.717
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.717
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N 0.717
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I 0.712
Sb05g000550 Sorghum bicolor Sb05g000550 I 0.709
Ca_13575 Cicer arietinum Ca_13575 I 0.707
mgf018189m Mimulus guttatus mgf018189m I 0.707
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.707
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I 0.707
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.707
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.707
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.707
OS03G0659700 Oryza sativa OS03G0659700 I 0.702