CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10004707.g
(
Linum usitatissimum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Lus10004707.g
T247012_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10004707
LOB
4
103
SCGACKFLRRKCMQECVFAPYFSYHQAASHFGAVHKVFGASNVSKLLLRLPVNFRSDAAVTIAYQALARIQDPAYGCVSYIMALQQQVASIQHEIEIFSH
Links
Other
LOB
family TFs
Other
Linum usitatissimum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10040274.g
Linum usitatissimum
Lus10040274.g
N
0.885
30143.m001171
Ricinus communis
30143.m001171
N
0.758
POPTR_0010s20800
Populus trichocarpa
POPTR_0010s20800
I
0.758
PK00972.1
Cannabis sativa
PK00972.1
I
0.750
gene26330-v1.0-hybrid
Fragaria vesca
gene26330-v1.0-hybrid
N
0.747
SapurV1A.0281s0190
Salix purpurea
SapurV1A.0281s0190
I
0.747
cassava34632.m1
Manihot esculenta
cassava34632.m1
N
0.747
LjSGA_054888.1
Lotus japonicus
LjSGA_054888.1
I
0.739
evm.TU.supercontig_1.438
Carica papaya
evm.TU.supercontig_1.438
I
0.737
TCM_042730
Theobroma cacao
TCM_042730
I
0.737
MDP0000123797
Malus domestica
MDP0000123797
N
0.737
MDP0000133936
Malus domestica
MDP0000133936
N
0.737
Gorai.011G267700
Gossypium raimondii
Gorai.011G267700
I
0.727
Pm018835
Prunus mume
Pm018835
N
0.727
Eucgr.G02955
Eucalyptus grandis
Eucgr.G02955
I
0.727
PRUPE_ppa018815mg
Prunus persica
PRUPE_ppa018815mg
N
0.727
MTR_5g080470
Medicago truncatula
MTR_5g080470
N
0.717
Ciclev10033354m.g
Citrus clementina
Ciclev10033354m.g
I
0.717
cassava15468.m1
Manihot esculenta
cassava15468.m1
I
0.713
LBD33
Vitis vinifera
VIT_13s0019g02060
N
0.707
Ca_16122
Cicer arietinum
Ca_16122
N
0.707
GLYMA02G41710
Glycine max
GLYMA02G41710
N
0.707