CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10006679.g
(
Linum usitatissimum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Lus10006679.g
T247015_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10006679
LOB
7
105
PCAACKLQRRKCTQECIFAPHFPPDQPQKFADIHKVFGASNVAKMLSELPAMSREEAVISLSYEAGARIRDPVYGCVSAISELQHRLKQLHMEIDAGKQ
Links
Other
LOB
family TFs
Other
Linum usitatissimum
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10007024.g
Linum usitatissimum
Lus10007024.g
N
0.960
Lus10038261.g
Linum usitatissimum
Lus10038261.g
N
0.939
Lus10025840.g
Linum usitatissimum
Lus10025840.g
N
0.919
Thhalv10004535m.g
Eutrema salsugineum
Thhalv10004535m.g
I
0.737
GLYMA06G11181
Glycine max
GLYMA06G11181
I
0.727
Lus10005313.g
Linum usitatissimum
Lus10005313.g
I
0.727
PK18922.1
Cannabis sativa
PK18922.1
I
0.719
Carubv10026811m.g
Capsella rubella
Carubv10026811m.g
I
0.717
Lus10016769.g
Linum usitatissimum
Lus10016769.g
I
0.717
Lus10022463.g
Linum usitatissimum
Lus10022463.g
I
0.717
SapurV1A.0641s0140
Salix purpurea
SapurV1A.0641s0140
I
0.717
Bostr.0568s0111
Boechera stricta
Bostr.0568s0111
I
0.717
SapurV1A.0811s0020
Salix purpurea
SapurV1A.0811s0020
I
0.717
Cagra.20099s0001
Capsella grandiflora
Cagra.20099s0001
I
0.717
cassava16846.m1
Manihot esculenta
cassava16846.m1
I
0.717
GLYMA04G11991
Glycine max
GLYMA04G11991
I
0.717
POPTR_0007s11460
Populus trichocarpa
POPTR_0007s11460
I
0.717
29676.m001633
Ricinus communis
29676.m001633
I
0.717
ASL1
Arabidopsis lyrata
fgenesh2_kg.8__2729__AT5G66870.1
I
0.717
orange1.1g039589m.g
Citrus sinensis
orange1.1g039589m.g
I
0.707
PRUPE_ppa026393mg
Prunus persica
PRUPE_ppa026393mg
I
0.707
TCM_000560
Theobroma cacao
TCM_000560
I
0.707
SapurV1A.0428s0090
Salix purpurea
SapurV1A.0428s0090
I
0.707
VIT_07s0197g00020
Vitis vinifera
VIT_07s0197g00020
I
0.707
Ciclev10027275m.g
Citrus clementina
Ciclev10027275m.g
I
0.707
LBD36
Arabidopsis thaliana
AT5G66870
I
0.707
evm.TU.supercontig_6.423
Carica papaya
evm.TU.supercontig_6.423
I
0.707
Pm026450
Prunus mume
Pm026450
I
0.707
VIT_16s0022g02050
Vitis vinifera
VIT_16s0022g02050
I
0.707
Cla020438
Citrullus lanatus
Cla020438
I
0.707
VIT_00s1247g00010
Vitis vinifera
VIT_00s1247g00010
I
0.707