MDP0000220708 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000220708 T247093_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000220708 LOB 12 110

Links

Other LOB family TFs
Other Malus domestica TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK29334.1 Cannabis sativa PK29334.1 I 0.938
MDP0000943252 Malus domestica MDP0000943252 N 0.929
LBD21 Vitis vinifera VIT_13s0067g01450 N 0.889
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.889
cassava20837.m1 Manihot esculenta cassava20837.m1 N 0.889
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N 0.879
Pm018957 Prunus mume Pm018957 N 0.879
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N 0.879
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N 0.879
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 0.879
Lus10028986.g Linum usitatissimum Lus10028986.g N 0.879
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.879
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N 0.879
cassava41267.m1 Manihot esculenta cassava41267.m1 N 0.879
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N 0.879
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N 0.869
TCM_042466 Theobroma cacao TCM_042466 N 0.869
Cucsa.136740 Cucumis sativus Cucsa.136740 N 0.863
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N 0.859
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N 0.859
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N 0.848
GLYMA14G06270 Glycine max GLYMA14G06270 N 0.848
GLYMA18G02910 Glycine max GLYMA18G02910 N 0.848
29814.m000742 Ricinus communis 29814.m000742 N 0.848
GLYMA02G43220 Glycine max GLYMA02G43220 N 0.848
LjSGA_139647.1 Lotus japonicus LjSGA_139647.1 N 0.846
GLYMA11G35500 Glycine max GLYMA11G35500 N 0.838
MTR_3g071420 Medicago truncatula MTR_3g071420 N 0.828
MTR_5g083010 Medicago truncatula MTR_5g083010 N 0.828
Ca_12464 Cicer arietinum Ca_12464 N 0.818
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N 0.818
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N 0.808
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N 0.808
mgf019866m Mimulus guttatus mgf019866m N 0.798
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N 0.778
Carubv10015898m.g Capsella rubella Carubv10015898m.g N 0.778
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N 0.778
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N 0.778
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N 0.778
LBD21 Arabidopsis thaliana AT3G11090 N 0.778
Bo5g136860 Brassica oleracea Bo5g136860 N 0.747
Bra034867 Brassica rapa Bra034867 N 0.747
F775_33210 Aegilops tauschii F775_33210 I 0.726
Aquca_045_00193 Aquilegia coerulea Aquca_045_00193 N 0.707
PK17019.1 Cannabis sativa PK17019.1 I 0.706
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.702