MDP0000233303 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000233303 T247095_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000233303 LOB 29 131

Links

Other LOB family TFs
Other Malus domestica TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.848
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.847
Pm029059 Prunus mume Pm029059 N 0.838
PK04625.1 Cannabis sativa PK04625.1 N 0.837
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.827
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.827
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.827
MDP0000446238 Malus domestica MDP0000446238 N 0.826
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.816
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.816
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.816
LBD42 Arabidopsis thaliana AT1G68510 N 0.814
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.814
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.808
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.806
Cla007208 Citrullus lanatus Cla007208 N 0.806
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.806
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.806
cassava38982.m1 Manihot esculenta cassava38982.m1 N 0.806
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.806
TCM_009888 Theobroma cacao TCM_009888 N 0.806
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.806
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.806
Bo6g106960 Brassica oleracea Bo6g106960 N 0.804
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N 0.804
Carubv10022391m.g Capsella rubella Carubv10022391m.g N 0.804
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.804
Bra004315 Brassica rapa Bra004315 N 0.804
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.800
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.798
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.798
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.798
TCM_019459 Theobroma cacao TCM_019459 N 0.798
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.798
TCM_012338 Theobroma cacao TCM_012338 N 0.796
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.796
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.796
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.796
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.796
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.796
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.796
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.796
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N 0.796
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.796
PK03169.1 Cannabis sativa PK03169.1 N 0.794
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N 0.794
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.794
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N 0.788
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N 0.788
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N 0.788
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.788
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.788
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N 0.788
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.788
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.788
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.786
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.786
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.786
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.786
Sb09g030780 Sorghum bicolor Sb09g030780 N 0.786
Cucsa.283560 Cucumis sativus Cucsa.283560 N 0.786
mgf011656m Mimulus guttatus mgf011656m N 0.786
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.786
Thhalv10019494m.g Eutrema salsugineum Thhalv10019494m.g N 0.786
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N 0.786
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N 0.784
28207.m000107 Ricinus communis 28207.m000107 N 0.778
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.778
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.778
gene10300-v1.0-hybrid Fragaria vesca gene10300-v1.0-hybrid N 0.778
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N 0.778
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.776
OBART01G17510 Oryza barthii OBART01G17510 N 0.776
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.776
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N 0.776
Cla020705 Citrullus lanatus Cla020705 N 0.776
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.776
Pavir.J01483 Panicum virgatum Pavir.J01483 N 0.776
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.776
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.776
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.776
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.776
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.776
OS01G0511000 Oryza sativa OS01G0511000 N 0.776
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.776
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.776
mgf010898m Mimulus guttatus mgf010898m N 0.776
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.776
Si004887m.g Setaria italica Si004887m.g N 0.775
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.773
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.768
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.768
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N 0.768
MDP0000136037 Malus domestica MDP0000136037 N 0.768
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.768
Bra021433 Brassica rapa Bra021433 N 0.768
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.768
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.768
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.768
LBD40 Arabidopsis thaliana AT1G67100 N 0.768
Bo3g055690 Brassica oleracea Bo3g055690 N 0.768
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.768
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.768
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.765
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N 0.765
mgf017960m Mimulus guttatus mgf017960m N 0.765
Bostr.2902s0344 Boechera stricta Bostr.2902s0344 N 0.765
Cucsa.199060 Cucumis sativus Cucsa.199060 N 0.765
27524.m000293 Ricinus communis 27524.m000293 N 0.765
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N 0.765
Cla019264 Citrullus lanatus Cla019264 N 0.765
Bostr.26959s0198 Boechera stricta Bostr.26959s0198 N 0.758
Bo1g156310 Brassica oleracea Bo1g156310 N 0.758
Thhalv10021328m.g Eutrema salsugineum Thhalv10021328m.g N 0.758
Ca_22996 Cicer arietinum Ca_22996 N 0.758
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.758
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N 0.755
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.755
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.755
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.755
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.755
Sb09g025710 Sorghum bicolor Sb09g025710 N 0.753
VIT_01s0011g03530 Vitis vinifera VIT_01s0011g03530 N 0.753
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N 0.747
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N 0.747
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N 0.747
Carubv10015363m.g Capsella rubella Carubv10015363m.g N 0.747
Cagra.1194s0049 Capsella grandiflora Cagra.1194s0049 N 0.747
Bostr.1460s0172 Boechera stricta Bostr.1460s0172 N 0.747
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N 0.747
LBD41 Arabidopsis thaliana AT3G02550 N 0.747
Bo2g055410 Brassica oleracea Bo2g055410 N 0.747
GRMZM2G386674 Zea mays GRMZM2G386674 N 0.745
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.745
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.745
Si022660m.g Setaria italica Si022660m.g N 0.745
Pavir.J11724 Panicum virgatum Pavir.J11724 N 0.745
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.742
OLONG_008015 Oryza longistaminata OLONG_008015 N 0.741
Cagra.6845s0054 Capsella grandiflora Cagra.6845s0054 N 0.737
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N 0.737
GLYMA20G24950 Glycine max GLYMA20G24950 N 0.737
BGIOSGA002703 Oryza indica BGIOSGA002703 N 0.735
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N 0.735
OPUNC01G01670 Oryza punctata OPUNC01G01670 N 0.735
ONIVA01G02110 Oryza nivara ONIVA01G02110 N 0.735
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N 0.735
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N 0.735
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N 0.735
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.735
OMERI01G01380 Oryza meridionalis OMERI01G01380 N 0.735
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N 0.735
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N 0.735
LPERR01G01830 Leersia perrieri LPERR01G01830 N 0.735
OBART01G01940 Oryza barthii OBART01G01940 N 0.735
OB01G11830 Oryza brachyantha OB01G11830 N 0.735
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N 0.727
PK04548.1 Cannabis sativa PK04548.1 N 0.724
GRMZM2G073044 Zea mays GRMZM2G073044 N 0.724
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.724
AC234149.1_FG002 Zea mays AC234149.1_FG002 N 0.724
MDP0000131978 Malus domestica MDP0000131978 N 0.722
GLYMA08G31143 Glycine max GLYMA08G31143 N 0.717
Si002412m.g Setaria italica Si002412m.g N 0.714
LjSGA_023437.1 Lotus japonicus LjSGA_023437.1 N 0.714
Traes_4BL_7F70575F9 Triticum aestivum Traes_4BL_7F70575F9 N 0.704
Pm015540 Prunus mume Pm015540 N 0.703