MDP0000239820 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000239820 T247096_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000239820 LOB 27 129

Links

Other LOB family TFs
Other Malus domestica TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28152.m000905 Ricinus communis 28152.m000905 N 0.794
29661.m000902 Ricinus communis 29661.m000902 N 0.898
30170.m013752 Ricinus communis 30170.m013752 N 0.827
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.814
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.857
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.888
LBD38 Arabidopsis thaliana AT3G49940 N 0.876
LBD39 Arabidopsis thaliana AT4G37540 N 0.856
LBD37 Arabidopsis thaliana AT5G67420 N 0.837
BGIOSGA010258 Oryza indica BGIOSGA010258 N 0.711
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.845
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.784
Bo1g003550 Brassica oleracea Bo1g003550 N 0.866
Bo2g168020 Brassica oleracea Bo2g168020 N 0.835
Bo3g055690 Brassica oleracea Bo3g055690 N 0.701
Bo5g132850 Brassica oleracea Bo5g132850 N 0.827
Bo7g063630 Brassica oleracea Bo7g063630 N 0.845
Bo7g099150 Brassica oleracea Bo7g099150 N 0.856
Bo7g118580 Brassica oleracea Bo7g118580 N 0.816
Bo8g079200 Brassica oleracea Bo8g079200 N 0.856
Bo9g018500 Brassica oleracea Bo9g018500 N 0.814
Bo9g019150 Brassica oleracea Bo9g019150 N 0.827
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.835
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.845
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.847
Bra011772 Brassica rapa Bra011772 N 0.857
Bra012164 Brassica rapa Bra012164 N 0.845
Bra012913 Brassica rapa Bra012913 N 0.856
Bra017831 Brassica rapa Bra017831 N 0.814
Bra021433 Brassica rapa Bra021433 N 0.701
Bra031833 Brassica rapa Bra031833 N 0.825
Bra036040 Brassica rapa Bra036040 N 0.856
Bra037847 Brassica rapa Bra037847 N 0.845
BRADI1G22920 Brachypodium distachyon BRADI1G22920 N 0.745
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.835
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.887
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.866
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.887
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.866
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.825
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.835
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.918
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.816
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.898
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.814
Ca_02208 Cicer arietinum Ca_02208 N 0.887
Ca_09342 Cicer arietinum Ca_09342 N 0.918
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.732
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.897
chr5.CM0200.600.nd Lotus japonicus chr5.CM0200.600.nd N 0.714
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N 0.776
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.907
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.814
Cla014228 Citrullus lanatus Cla014228 N 0.907
Cla020920 Citrullus lanatus Cla020920 N 0.794
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.907
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.794
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.773
Eucgr.F00115 Eucalyptus grandis Eucgr.F00115 N 0.784
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N 0.765
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.907
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.835
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.814
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.907
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.825
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N 0.847
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.835
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.763
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.918
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.784
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.888
GLYMA05G22120 Glycine max GLYMA05G22120 N 0.888
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.773
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.888
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.784
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.888
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.773
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.794
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.804
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.876
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.918
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N 0.908
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N 0.776
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.784
GRMZM2G017319 Zea mays GRMZM2G017319 N 0.711
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.845
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.701
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.784
GSMUA_Achr2G13440_001 Musa acuminata GSMUA_Achr2G13440_001 N 0.753
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.887
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.888
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.887
GSMUA_Achr4G32550_001 Musa acuminata GSMUA_Achr4G32550_001 N 0.729
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.814
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N 0.888
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.845
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.825
LjSGA_036652.1 Lotus japonicus LjSGA_036652.1 N 0.828
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.837
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.794
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.907
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.794
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.907
MDP0000139025 Malus domestica MDP0000139025 N 0.784
MDP0000151330 Malus domestica MDP0000151330 N 1.000
MDP0000247079 Malus domestica MDP0000247079 N 0.753
MDP0000261146 Malus domestica MDP0000261146 N 0.753
MDP0000487015 Malus domestica MDP0000487015 N 0.786
MDP0000747679 Malus domestica MDP0000747679 N 0.786
MDP0000794101 Malus domestica MDP0000794101 N 0.763
mgf007319m Mimulus guttatus mgf007319m N 0.825
mgf016023m Mimulus guttatus mgf016023m N 0.794
mgf016064m Mimulus guttatus mgf016064m N 0.847
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.784
MTR_1g106420 Medicago truncatula MTR_1g106420 N 0.732
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.907
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.887
OB03G31560 Oryza brachyantha OB03G31560 N 0.847
OB03G33950 Oryza brachyantha OB03G33950 N 0.722
OBART03G22820 Oryza barthii OBART03G22820 N 0.845
OBART03G25820 Oryza barthii OBART03G25820 N 0.711
OBART07G20600 Oryza barthii OBART07G20600 N 0.784
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.837
OGLUM03G26640 Oryza glumaepatula OGLUM03G26640 N 0.711
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.784
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.845
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.845
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.784
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.845
ONIVA03G26970 Oryza nivara ONIVA03G26970 N 0.711
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.784
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.845
OPUNC03G23160 Oryza punctata OPUNC03G23160 N 0.711
OPUNC07G19440 Oryza punctata OPUNC07G19440 N 0.784
OPUNC07G19460 Oryza punctata OPUNC07G19460 N 0.784
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.907
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N 0.776
orange1.1g029970m.g Citrus sinensis orange1.1g029970m.g N 0.718
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.845
ORGLA03G0239300 Oryza glaberrima ORGLA03G0239300 N 0.711
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.784
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.845
ORUFI03G26700 Oryza rufipogon ORUFI03G26700 N 0.711
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.784
OS03G0445700 Oryza sativa OS03G0445700 N 0.845
OS03G0609500 Oryza sativa OS03G0609500 N 0.711
OS07G0589000 Oryza sativa OS07G0589000 N 0.784
Pavir.Ba01055 Panicum virgatum Pavir.Ba01055 N 0.776
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N 0.796
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.825
Pavir.J16587 Panicum virgatum Pavir.J16587 N 0.711
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.827
PGSC0003DMG400021509 Solanum tuberosum PGSC0003DMG400021509 N 0.753
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.888
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.804
PK03075.1 Cannabis sativa PK03075.1 N 0.897
PK03977.1 Cannabis sativa PK03977.1 N 0.816
PK15647.1 Cannabis sativa PK15647.1 N 0.840
PK25954.1 Cannabis sativa PK25954.1 N 0.739
Pm005389 Prunus mume Pm005389 N 0.804
Pm021281 Prunus mume Pm021281 N 0.814
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.773
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.794
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.897
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.897
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.784
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.825
PRUPE_ppa010480mg Prunus persica PRUPE_ppa010480mg N 0.732
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.804
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N 0.806
SapurV1A.0019s0260 Salix purpurea SapurV1A.0019s0260 N 0.776
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.897
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.887
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.835
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.804
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.804
Sb01g031790 Sorghum bicolor Sb01g031790 N 0.835
Sb02g038030 Sorghum bicolor Sb02g038030 N 0.796
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.866
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.867
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.867
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.784
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.845
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.845
SELMODRAFT_61520 Selaginella moellendorffii SELMODRAFT_61520 N 0.786
Si031011m.g Setaria italica Si031011m.g N 0.796
Si037275m.g Setaria italica Si037275m.g N 0.711
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N 0.786
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.888
Solyc04g077990.2 Solanum lycopersicum Solyc04g077990.2 N 0.735
TCM_000766 Theobroma cacao TCM_000766 N 0.918
TCM_007211 Theobroma cacao TCM_007211 N 0.784
TCM_034722 Theobroma cacao TCM_034722 N 0.773
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.835
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.856
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.866
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.763
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.753
Traes_4AL_7241716B6 Triticum aestivum Traes_4AL_7241716B6 N 0.711
TRIUR3_28321 Triticum urartu TRIUR3_28321 N 0.711
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N 0.806
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.856
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.845