MDP0000487015 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000487015 T247128_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000487015 LOB 66 168

Links

Other LOB family TFs
Other Malus domestica TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28152.m000905 Ricinus communis 28152.m000905 N 0.735
29661.m000902 Ricinus communis 29661.m000902 N 0.837
30170.m013752 Ricinus communis 30170.m013752 N 0.898
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.765
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.816
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.806
LBD38 Arabidopsis thaliana AT3G49940 N 0.786
LBD39 Arabidopsis thaliana AT4G37540 N 0.786
LBD37 Arabidopsis thaliana AT5G67420 N 0.735
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.755
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.724
Bo1g003550 Brassica oleracea Bo1g003550 N 0.796
Bo2g168020 Brassica oleracea Bo2g168020 N 0.745
Bo5g132850 Brassica oleracea Bo5g132850 N 0.745
Bo7g063630 Brassica oleracea Bo7g063630 N 0.755
Bo7g099150 Brassica oleracea Bo7g099150 N 0.776
Bo7g118580 Brassica oleracea Bo7g118580 N 0.796
Bo8g079200 Brassica oleracea Bo8g079200 N 0.755
Bo9g018500 Brassica oleracea Bo9g018500 N 0.755
Bo9g019150 Brassica oleracea Bo9g019150 N 0.745
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.745
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.765
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.786
Bra011772 Brassica rapa Bra011772 N 0.796
Bra012164 Brassica rapa Bra012164 N 0.755
Bra012913 Brassica rapa Bra012913 N 0.776
Bra017831 Brassica rapa Bra017831 N 0.796
Bra031833 Brassica rapa Bra031833 N 0.745
Bra036040 Brassica rapa Bra036040 N 0.755
Bra037847 Brassica rapa Bra037847 N 0.755
BRADI1G22920 Brachypodium distachyon BRADI1G22920 N 0.704
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.745
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.816
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.776
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.816
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.776
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.735
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.908
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.837
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.898
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.847
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.755
Ca_02208 Cicer arietinum Ca_02208 N 0.806
Ca_09342 Cicer arietinum Ca_09342 N 0.827
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.714
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.806
chr5.CM0200.600.nd Lotus japonicus chr5.CM0200.600.nd N 0.704
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N 0.898
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.806
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.745
Cla014228 Citrullus lanatus Cla014228 N 0.827
Cla020920 Citrullus lanatus Cla020920 N 0.878
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.827
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.847
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.755
Eucgr.F00115 Eucalyptus grandis Eucgr.F00115 N 0.856
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N 0.755
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.816
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.765
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.847
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.816
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.765
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N 0.796
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.745
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.888
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.816
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.724
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.827
GLYMA04G04750 Glycine max GLYMA04G04750 N 0.724
GLYMA05G22120 Glycine max GLYMA05G22120 N 0.796
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.714
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.827
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.847
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.816
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.827
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.724
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.704
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.837
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.827
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N 0.816
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N 0.878
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.857
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.765
GSMUA_Achr2G13440_001 Musa acuminata GSMUA_Achr2G13440_001 N 0.704
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.776
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.776
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.745
GSMUA_Achr4G32550_001 Musa acuminata GSMUA_Achr4G32550_001 N 0.708
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.724
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N 0.755
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.776
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.796
LjSGA_036652.1 Lotus japonicus LjSGA_036652.1 N 0.741
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.755
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.827
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.816
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.847
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.816
MDP0000139025 Malus domestica MDP0000139025 N 0.745
MDP0000151330 Malus domestica MDP0000151330 N 0.786
MDP0000239820 Malus domestica MDP0000239820 N 0.786
MDP0000247079 Malus domestica MDP0000247079 N 0.704
MDP0000261146 Malus domestica MDP0000261146 N 0.704
MDP0000747679 Malus domestica MDP0000747679 N 1.000
MDP0000794101 Malus domestica MDP0000794101 N 0.908
mgf007319m Mimulus guttatus mgf007319m N 0.816
mgf016023m Mimulus guttatus mgf016023m N 0.745
mgf016064m Mimulus guttatus mgf016064m N 0.816
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.704
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.816
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.806
OB03G31560 Oryza brachyantha OB03G31560 N 0.765
OBART03G22820 Oryza barthii OBART03G22820 N 0.755
OBART07G20600 Oryza barthii OBART07G20600 N 0.724
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.755
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.724
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.755
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.755
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.724
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.755
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.724
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.755
OPUNC07G19440 Oryza punctata OPUNC07G19440 N 0.724
OPUNC07G19460 Oryza punctata OPUNC07G19460 N 0.724
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.806
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N 0.898
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.755
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.724
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.755
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.724
OS03G0445700 Oryza sativa OS03G0445700 N 0.755
OS07G0589000 Oryza sativa OS07G0589000 N 0.724
Pavir.Ba01055 Panicum virgatum Pavir.Ba01055 N 0.704
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N 0.724
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.704
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.745
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.755
PGSC0003DMG400021509 Solanum tuberosum PGSC0003DMG400021509 N 0.796
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.827
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.755
PK03075.1 Cannabis sativa PK03075.1 N 0.786
PK03977.1 Cannabis sativa PK03977.1 N 0.867
PK04625.1 Cannabis sativa PK04625.1 N 0.744
PK15647.1 Cannabis sativa PK15647.1 N 0.778
Pm005389 Prunus mume Pm005389 N 0.949
Pm021281 Prunus mume Pm021281 N 0.735
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.704
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.878
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.816
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.827
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.714
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.878
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.949
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N 0.735
SapurV1A.0019s0260 Salix purpurea SapurV1A.0019s0260 N 0.724
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.827
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.806
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.867
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.867
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.867
Sb01g031790 Sorghum bicolor Sb01g031790 N 0.753
Sb02g038030 Sorghum bicolor Sb02g038030 N 0.724
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.776
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.816
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.816
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.724
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.786
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.786
SELMODRAFT_61520 Selaginella moellendorffii SELMODRAFT_61520 N 0.724
Si031011m.g Setaria italica Si031011m.g N 0.724
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N 0.745
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.827
Solyc04g077990.2 Solanum lycopersicum Solyc04g077990.2 N 0.786
TCM_000766 Theobroma cacao TCM_000766 N 0.827
TCM_007211 Theobroma cacao TCM_007211 N 0.704
TCM_034722 Theobroma cacao TCM_034722 N 0.878
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.745
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.765
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.796
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.714
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.704
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N 0.796
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.786
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.867