Pavir.Ba02946 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.Ba02946 T247184_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba02946.1.p LOB 60 158

Links

Other LOB family TFs
Other Panicum virgatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J19395 Panicum virgatum Pavir.J19395 N 1.000
Pavir.J09527 Panicum virgatum Pavir.J09527 N 0.990
Si030262m.g Setaria italica Si030262m.g N 0.818
GSMUA_Achr5G15570_001 Musa acuminata GSMUA_Achr5G15570_001 N 0.714
ORUFI08G15760 Oryza rufipogon ORUFI08G15760 N 0.707
OS08G0402100 Oryza sativa OS08G0402100 N 0.707
ORGLA08G0122300 Oryza glaberrima ORGLA08G0122300 N 0.707
OPUNC08G12580 Oryza punctata OPUNC08G12580 N 0.707
BRADI3G35280 Brachypodium distachyon BRADI3G35280 N 0.707
OBART08G13930 Oryza barthii OBART08G13930 N 0.707
OGLUM08G14700 Oryza glumaepatula OGLUM08G14700 N 0.707
ONIVA08G14880 Oryza nivara ONIVA08G14880 N 0.707
BGIOSGA028630 Oryza indica BGIOSGA028630 N 0.707