Pavir.Cb01140 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.Cb01140 T247190_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb01140.1.p LOB 20 118

Links

Other LOB family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si015521m.g Setaria italica Si015521m.g N 0.970
Pavir.J04242 Panicum virgatum Pavir.J04242 N 0.970
Pavir.Fb01953 Panicum virgatum Pavir.Fb01953 N 0.919
GRMZM2G132667 Zea mays GRMZM2G132667 N 0.899
Sb07g026800 Sorghum bicolor Sb07g026800 N 0.889
Traes_5BL_26B26165E Triticum aestivum Traes_5BL_26B26165E N 0.771
ORUFI08G22960 Oryza rufipogon ORUFI08G22960 N 0.747
TRIUR3_34186 Triticum urartu TRIUR3_34186 N 0.747
ONIVA08G23410 Oryza nivara ONIVA08G23410 N 0.747
OMERI02G02130 Oryza meridionalis OMERI02G02130 N 0.747
BGIOSGA029005 Oryza indica BGIOSGA029005 N 0.747
OBART08G20460 Oryza barthii OBART08G20460 N 0.747
OGLUM08G21760 Oryza glumaepatula OGLUM08G21760 N 0.747
F775_04514 Aegilops tauschii F775_04514 N 0.737
LPERR08G17300 Leersia perrieri LPERR08G17300 N 0.737
OB08G27360 Oryza brachyantha OB08G27360 N 0.737
OGLUM03G36620 Oryza glumaepatula OGLUM03G36620 N 0.717
OPUNC08G18660 Oryza punctata OPUNC08G18660 N 0.717
LPERR03G31200 Leersia perrieri LPERR03G31200 N 0.717
BGIOSGA013705 Oryza indica BGIOSGA013705 N 0.717
Si039129m.g Setaria italica Si039129m.g N 0.707
OPUNC03G33890 Oryza punctata OPUNC03G33890 N 0.707