Pavir.Fb01953 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.Fb01953 T247204_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb01953.1.p LOB 24 122

Links

Other LOB family TFs
Other Panicum virgatum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si015521m.g Setaria italica Si015521m.g N 0.949
Pavir.J04242 Panicum virgatum Pavir.J04242 N 0.929
Pavir.Cb01140 Panicum virgatum Pavir.Cb01140 N 0.919
Sb07g026800 Sorghum bicolor Sb07g026800 N 0.879
GRMZM2G132667 Zea mays GRMZM2G132667 N 0.879
Traes_5BL_26B26165E Triticum aestivum Traes_5BL_26B26165E N 0.771
ONIVA08G23410 Oryza nivara ONIVA08G23410 N 0.758
ORUFI08G22960 Oryza rufipogon ORUFI08G22960 N 0.758
OGLUM08G21760 Oryza glumaepatula OGLUM08G21760 N 0.758
OMERI02G02130 Oryza meridionalis OMERI02G02130 N 0.758
F775_04514 Aegilops tauschii F775_04514 N 0.758
OBART08G20460 Oryza barthii OBART08G20460 N 0.758
BGIOSGA029005 Oryza indica BGIOSGA029005 N 0.758
OLONG_019406 Oryza longistaminata OLONG_019406 N 0.755
OS08G0517100 Oryza sativa OS08G0517100 N 0.755
LPERR08G17300 Leersia perrieri LPERR08G17300 N 0.747
OB08G27360 Oryza brachyantha OB08G27360 N 0.747
TRIUR3_34186 Triticum urartu TRIUR3_34186 N 0.747
OPUNC08G18660 Oryza punctata OPUNC08G18660 N 0.737
Pavir.Fa00418 Panicum virgatum Pavir.Fa00418 N 0.717
Sb01g005700 Sorghum bicolor Sb01g005700 N 0.717
BGIOSGA013705 Oryza indica BGIOSGA013705 N 0.707
OGLUM03G36620 Oryza glumaepatula OGLUM03G36620 N 0.707
LPERR03G31200 Leersia perrieri LPERR03G31200 N 0.707