Pavir.J05299 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.J05299 T247226_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05299.1.p LOB 69 167

Links

Other LOB family TFs
Other Panicum virgatum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.J09684 Panicum virgatum Pavir.J09684 N 0.970
Sb01g005700 Sorghum bicolor Sb01g005700 N 0.879
GRMZM2G011385 Zea mays GRMZM2G011385 N 0.879
Si039129m.g Setaria italica Si039129m.g N 0.828
OPUNC03G33890 Oryza punctata OPUNC03G33890 N 0.788
BGIOSGA013705 Oryza indica BGIOSGA013705 N 0.778
OGLUM03G36620 Oryza glumaepatula OGLUM03G36620 N 0.768
LPERR03G31200 Leersia perrieri LPERR03G31200 N 0.768
ORGLA03G0338000 Oryza glaberrima ORGLA03G0338000 N 0.755
BRADI3G40650 Brachypodium distachyon BRADI3G40650 N 0.750
Traes_5BL_26B26165E Triticum aestivum Traes_5BL_26B26165E N 0.750
ORUFI08G22960 Oryza rufipogon ORUFI08G22960 N 0.747
ONIVA08G23410 Oryza nivara ONIVA08G23410 N 0.747
OMERI02G02130 Oryza meridionalis OMERI02G02130 N 0.747
OBART08G20460 Oryza barthii OBART08G20460 N 0.747
OGLUM08G21760 Oryza glumaepatula OGLUM08G21760 N 0.747
BGIOSGA029005 Oryza indica BGIOSGA029005 N 0.747
OS08G0517100 Oryza sativa OS08G0517100 N 0.735
OLONG_019406 Oryza longistaminata OLONG_019406 N 0.735
OB08G27360 Oryza brachyantha OB08G27360 N 0.727
OPUNC08G18660 Oryza punctata OPUNC08G18660 N 0.717
Pavir.J04242 Panicum virgatum Pavir.J04242 N 0.717
F775_04514 Aegilops tauschii F775_04514 N 0.717
LPERR08G17300 Leersia perrieri LPERR08G17300 N 0.717
Si015521m.g Setaria italica Si015521m.g N 0.707
TRIUR3_34186 Triticum urartu TRIUR3_34186 N 0.707