Pavir.J38430 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.J38430 T247250_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J38430.1.p LOB 9 108

Links

Other LOB family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J05697 Panicum virgatum Pavir.J05697 N 0.990
OPUNC01G08860 Oryza punctata OPUNC01G08860 N 0.980
ORUFI01G09790 Oryza rufipogon ORUFI01G09790 N 0.970
TRAES3BF081300020CFD_g Triticum aestivum TRAES3BF081300020CFD_g N 0.970
BGIOSGA003124 Oryza indica BGIOSGA003124 N 0.970
OS01G0242400 Oryza sativa OS01G0242400 N 0.970
ONIVA01G11590 Oryza nivara ONIVA01G11590 N 0.970
OMERI01G09040 Oryza meridionalis OMERI01G09040 N 0.970
LPERR01G08470 Leersia perrieri LPERR01G08470 N 0.970
OGLUM01G10300 Oryza glumaepatula OGLUM01G10300 N 0.970
ORGLA01G0080800 Oryza glaberrima ORGLA01G0080800 N 0.960
OBART01G08980 Oryza barthii OBART01G08980 N 0.960
BRADI2G08480 Brachypodium distachyon BRADI2G08480 N 0.960
Sb10g029595 Sorghum bicolor Sb10g029595 N 0.949
GRMZM2G180319 Zea mays GRMZM2G180319 N 0.939
Si005134m.g Setaria italica Si005134m.g N 0.909