CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.0068s0590
(
Salix purpurea
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
SapurV1A.0068s0590
T247266_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0068s0590.1.p
LOB
5
104
RCAACKYLRRRCPSDCIFSPYFPSNNPQRFACVHRIHGACNVAKMLQQLPAAHLRAEAANSLYYEAQCRTRDPVYGCVGIISSLHQQIHSVESQLAKTKA
Links
Other
LOB
family TFs
Other
Salix purpurea
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0012s13910
Populus trichocarpa
POPTR_0012s13910
I
0.929
POPTR_0015s13870
Populus trichocarpa
POPTR_0015s13870
N
0.929
SapurV1A.0400s0200
Salix purpurea
SapurV1A.0400s0200
I
0.909
29613.m000372
Ricinus communis
29613.m000372
N
0.808
cassava11118.m1
Manihot esculenta
cassava11118.m1
I
0.808
evm.TU.supercontig_1.339
Carica papaya
evm.TU.supercontig_1.339
I
0.788
TCM_035123
Theobroma cacao
TCM_035123
N
0.778
evm.TU.supercontig_1.335
Carica papaya
evm.TU.supercontig_1.335
I
0.778
Gorai.009G123600
Gossypium raimondii
Gorai.009G123600
N
0.768
Pm016263
Prunus mume
Pm016263
N
0.768
cassava35977.valid.m1
Manihot esculenta
cassava35977.valid.m1
I
0.758
PRUPE_ppa024504mg
Prunus persica
PRUPE_ppa024504mg
N
0.758
Eucgr.A02814
Eucalyptus grandis
Eucgr.A02814
I
0.747
Cucsa.250990
Cucumis sativus
Cucsa.250990
N
0.747
Gorai.008G280400
Gossypium raimondii
Gorai.008G280400
N
0.737
gene26806-v1.0-hybrid
Fragaria vesca
gene26806-v1.0-hybrid
N
0.737
VIT_16s0100g00440
Vitis vinifera
VIT_16s0100g00440
N
0.727
Cucsa.161230
Cucumis sativus
Cucsa.161230
N
0.727
Ca_16884
Cicer arietinum
Ca_16884
N
0.717
MDP0000288452
Malus domestica
MDP0000288452
N
0.714
Bostr.0556s0333
Boechera stricta
Bostr.0556s0333
I
0.707
MTR_5g093010
Medicago truncatula
MTR_5g093010
N
0.707