SapurV1A.1247s0030 (Salix purpurea)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 SapurV1A.1247s0030 T247305_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.939 0.939
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.1247s0030.1.p LOB 10 108

Links

Other LOB family TFs
Other Salix purpurea TFs

265 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I 0.980
Cucsa.196600 Cucumis sativus Cucsa.196600 I 0.970
GLYMA05G02530 Glycine max GLYMA05G02530 I 0.970
MDP0000130659 Malus domestica MDP0000130659 I 0.970
cassava33952.m1 Manihot esculenta cassava33952.m1 I 0.970
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I 0.970
Cla019510 Citrullus lanatus Cla019510 I 0.970
TCM_012190 Theobroma cacao TCM_012190 I 0.970
MTR_4g105170 Medicago truncatula MTR_4g105170 I 0.970
Ca_08824 Cicer arietinum Ca_08824 I 0.970
MDP0000254288 Malus domestica MDP0000254288 I 0.970
GLYMA17G09380 Glycine max GLYMA17G09380 I 0.970
cassava19770.m1 Manihot esculenta cassava19770.m1 I 0.970
LOB Vitis vinifera VIT_17s0000g09010 I 0.960
PRUPE_ppa023059mg Prunus persica PRUPE_ppa023059mg I 0.960
30147.m013890 Ricinus communis 30147.m013890 I 0.960
Pm024312 Prunus mume Pm024312 I 0.960
MTR_3g077240 Medicago truncatula MTR_3g077240 I 0.949
Lus10039940.g Linum usitatissimum Lus10039940.g I 0.949
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I 0.949
GLYMA06G18861 Glycine max GLYMA06G18861 I 0.949
Eucgr.K02809 Eucalyptus grandis Eucgr.K02809 I 0.949
Lus10027676.g Linum usitatissimum Lus10027676.g I 0.949
gene31797-v1.0-hybrid Fragaria vesca gene31797-v1.0-hybrid I 0.949
chr1.CM0171.410.nc Lotus japonicus chr1.CM0171.410.nc I 0.949
POPTR_0015s09370 Populus trichocarpa POPTR_0015s09370 I 0.949
Thhalv10004979m.g Eutrema salsugineum Thhalv10004979m.g I 0.939
Bo3g104760 Brassica oleracea Bo3g104760 I 0.939
PK21510.1 Cannabis sativa PK21510.1 I 0.939
LOB Arabidopsis lyrata scaffold_802995.1 I 0.939
Ca_07463 Cicer arietinum Ca_07463 I 0.939
LOB Arabidopsis thaliana AT5G63090 D 0.939
Cagra.5118s0045 Capsella grandiflora Cagra.5118s0045 I 0.939
Bra038606 Brassica rapa Bra038606 I 0.939
GLYMA04G36080 Glycine max GLYMA04G36080 I 0.939
Bostr.0568s0498 Boechera stricta Bostr.0568s0498 I 0.939
Carubv10028397m.g Capsella rubella Carubv10028397m.g I 0.939
Bo9g017470 Brassica oleracea Bo9g017470 I 0.929
PGSC0003DMG400018112 Solanum tuberosum PGSC0003DMG400018112 I 0.929
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I 0.919
Solyc03g112430.1 Solanum lycopersicum Solyc03g112430.1 I 0.919
Bra035860 Brassica rapa Bra035860 I 0.909
orange1.1g036845m.g Citrus sinensis orange1.1g036845m.g I 0.909
Ciclev10022371m.g Citrus clementina Ciclev10022371m.g I 0.909
mgf024603m Mimulus guttatus mgf024603m I 0.909
Aquca_011_00559 Aquilegia coerulea Aquca_011_00559 I 0.899
F775_25656 Aegilops tauschii F775_25656 I 0.899
Si002632m.g Setaria italica Si002632m.g I 0.889
MTR_7g033800 Medicago truncatula MTR_7g033800 I 0.889
PK26472.1 Cannabis sativa PK26472.1 I 0.889
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.889
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.889
POPTR_0001s35280 Populus trichocarpa POPTR_0001s35280 I 0.889
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.889
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.889
PRUPE_ppa018381mg Prunus persica PRUPE_ppa018381mg I 0.889
TCM_016952 Theobroma cacao TCM_016952 I 0.889
OB01G14220 Oryza brachyantha OB01G14220 I 0.889
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.889
Pm015649 Prunus mume Pm015649 I 0.889
SapurV1A.1328s0080 Salix purpurea SapurV1A.1328s0080 I 0.889
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.889
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.889
GLYMA19G12650 Glycine max GLYMA19G12650 I 0.879
mgf016361m Mimulus guttatus mgf016361m I 0.879
PGSC0003DMG400027078 Solanum tuberosum PGSC0003DMG400027078 I 0.879
OS01G0169400 Oryza sativa OS01G0169400 I 0.879
MDP0000848210 Malus domestica MDP0000848210 I 0.879
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.879
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.879
cassava12464.valid.m1 Manihot esculenta cassava12464.valid.m1 I 0.879
GLYMA16G07770 Glycine max GLYMA16G07770 I 0.879
29917.m001993 Ricinus communis 29917.m001993 I 0.879
Solyc06g071660.1 Solanum lycopersicum Solyc06g071660.1 I 0.879
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.879
OBART01G04470 Oryza barthii OBART01G04470 I 0.879
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.879
LBD25 Vitis vinifera VIT_14s0066g00680 I 0.879
Ca_24372 Cicer arietinum Ca_24372 I 0.879
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.870
Gorai.012G063800 Gossypium raimondii Gorai.012G063800 I 0.869
GLYMA19G00390 Glycine max GLYMA19G00390 I 0.869
PGSC0003DMG400012629 Solanum tuberosum PGSC0003DMG400012629 I 0.869
gene28478-v1.0-hybrid Fragaria vesca gene28478-v1.0-hybrid I 0.869
GLYMA05G08870 Glycine max GLYMA05G08870 I 0.869
LjSGA_042891.1 Lotus japonicus LjSGA_042891.1 I 0.869
Eucgr.J02237 Eucalyptus grandis Eucgr.J02237 I 0.869
Eucgr.I01750 Eucalyptus grandis Eucgr.I01750 I 0.869
PK18922.1 Cannabis sativa PK18922.1 I 0.860
Cucsa.339980 Cucumis sativus Cucsa.339980 I 0.859
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I 0.859
Cucsa.011300 Cucumis sativus Cucsa.011300 I 0.859
Cla010600 Citrullus lanatus Cla010600 I 0.859
Lus10022264.g Linum usitatissimum Lus10022264.g I 0.859
Cla017388 Citrullus lanatus Cla017388 I 0.859
Cucsa.098680 Cucumis sativus Cucsa.098680 I 0.859
Solyc02g086480.1 Solanum lycopersicum Solyc02g086480.1 I 0.848
Ciclev10017006m.g Citrus clementina Ciclev10017006m.g I 0.848
evm.TU.supercontig_108.62 Carica papaya evm.TU.supercontig_108.62 I 0.848
orange1.1g031572m.g Citrus sinensis orange1.1g031572m.g I 0.848
chr2.LjT30P12.80.nc Lotus japonicus chr2.LjT30P12.80.nc I 0.848
Gorai.007G075700 Gossypium raimondii Gorai.007G075700 I 0.838
Cla003499 Citrullus lanatus Cla003499 I 0.838
Solyc02g067800.2 Solanum lycopersicum Solyc02g067800.2 I 0.828
SELMODRAFT_68988 Selaginella moellendorffii SELMODRAFT_68988 I 0.828
PGSC0003DMG400006914 Solanum tuberosum PGSC0003DMG400006914 I 0.828
SELMODRAFT_59324 Selaginella moellendorffii SELMODRAFT_59324 I 0.828
PK17019.1 Cannabis sativa PK17019.1 I 0.824
LjSGA_017893.1 Lotus japonicus LjSGA_017893.1 I 0.824
F775_33210 Aegilops tauschii F775_33210 I 0.822
MTR_6g005070 Medicago truncatula MTR_6g005070 I 0.818
mgf003146m Mimulus guttatus mgf003146m I 0.808
gw1.170.36.1 Physcomitrella patens gw1.170.36.1 I 0.808
cassava3724.m1 Manihot esculenta cassava3724.m1 I 0.808
gw1.170.40.1 Physcomitrella patens gw1.170.40.1 I 0.808
AMTR_s00083p00067130 Amborella trichopoda AMTR_s00083p00067130 I 0.806
MTR_6g005080 Medicago truncatula MTR_6g005080 I 0.798
gw1.71.84.1 Physcomitrella patens gw1.71.84.1 I 0.798
Cagra.5575s0004 Capsella grandiflora Cagra.5575s0004 I 0.788
Bostr.0556s0446 Boechera stricta Bostr.0556s0446 I 0.788
LBD25 Arabidopsis lyrata fgenesh2_kg.5__545__AT3G27650.1 I 0.788
Bra025294 Brassica rapa Bra025294 I 0.788
Bo7g085860 Brassica oleracea Bo7g085860 I 0.788
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.788
Thhalv10005120m.g Eutrema salsugineum Thhalv10005120m.g I 0.788
LBD25 Arabidopsis thaliana AT3G27650 I 0.788
gw1.12.172.1 Physcomitrella patens gw1.12.172.1 I 0.788
Carubv10018238m.g Capsella rubella Carubv10018238m.g I 0.788
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.788
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.785
TRIUR3_10339 Triticum urartu TRIUR3_10339 I 0.781
GLYMA16G09720 Glycine max GLYMA16G09720 I 0.780
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.778
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.778
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.778
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.778
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.778
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.778
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.778
mgf014755m Mimulus guttatus mgf014755m I 0.778
Bra039072 Brassica rapa Bra039072 I 0.778
Aquca_058_00006 Aquilegia coerulea Aquca_058_00006 I 0.778
Cla005851 Citrullus lanatus Cla005851 I 0.778
MDP0000273432 Malus domestica MDP0000273432 I 0.778
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.778
AS2 Vitis vinifera VIT_00s0340g00090 I 0.778
Bo9g008330 Brassica oleracea Bo9g008330 I 0.778
Ca_20200 Cicer arietinum Ca_20200 I 0.778
Bo2g051420 Brassica oleracea Bo2g051420 I 0.768
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.768
LBD6 Arabidopsis thaliana AT1G65620 D 0.768
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I 0.768
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.768
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.768
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.768
Bra039733 Brassica rapa Bra039733 I 0.768
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.768
MDP0000643326 Malus domestica MDP0000643326 I 0.768
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.768
TCM_024217 Theobroma cacao TCM_024217 I 0.768
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.768
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.768
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.768
29929.m004500 Ricinus communis 29929.m004500 I 0.768
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.758
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.758
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.758
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.758
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.758
PK29334.1 Cannabis sativa PK29334.1 I 0.750
OLONG_009404 Oryza longistaminata OLONG_009404 I 0.747
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.747
Bra033019 Brassica rapa Bra033019 I 0.747
Bo2g144870 Brassica oleracea Bo2g144870 I 0.747
Lus10001139.g Linum usitatissimum Lus10001139.g I 0.741
GSMUA_Achr10G20760_001 Musa acuminata GSMUA_Achr10G20760_001 I 0.738
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I 0.737
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.727
Gorai.011G104600 Gossypium raimondii Gorai.011G104600 I 0.727
OS05G0417000 Oryza sativa OS05G0417000 I 0.727
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.727
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.727
F775_21760 Aegilops tauschii F775_21760 I 0.727
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.727
cassava32690.m1 Manihot esculenta cassava32690.m1 I 0.727
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.727
TCM_000560 Theobroma cacao TCM_000560 I 0.727
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.727
Gorai.007G210500 Gossypium raimondii Gorai.007G210500 I 0.727
OB05G24560 Oryza brachyantha OB05G24560 I 0.727
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.723
Si036905m.g Setaria italica Si036905m.g I 0.717
ONIVA01G44840 Oryza nivara ONIVA01G44840 I 0.717
LBD6 Oryza sativa OS01G0889400 I 0.717
Si002599m.g Setaria italica Si002599m.g I 0.717
PK21617.1 Cannabis sativa PK21617.1 I 0.717
TRIUR3_32863 Triticum urartu TRIUR3_32863 I 0.717
OPUNC01G38680 Oryza punctata OPUNC01G38680 I 0.717
OB01G48740 Oryza brachyantha OB01G48740 I 0.717
Pavir.J22284 Panicum virgatum Pavir.J22284 I 0.717
SapurV1A.0428s0090 Salix purpurea SapurV1A.0428s0090 I 0.717
SapurV1A.0641s0140 Salix purpurea SapurV1A.0641s0140 I 0.717
SapurV1A.0811s0020 Salix purpurea SapurV1A.0811s0020 I 0.717
ORGLA01G0339000 Oryza glaberrima ORGLA01G0339000 I 0.717
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.717
MLOC_72525 Hordeum vulgare MLOC_72525 I 0.717
LBD6 Oryza indica BGIOSGA004955 I 0.717
Bo2g167820 Brassica oleracea Bo2g167820 I 0.717
orange1.1g039589m.g Citrus sinensis orange1.1g039589m.g I 0.717
LPERR01G34430 Leersia perrieri LPERR01G34430 I 0.717
POPTR_0007s11460 Populus trichocarpa POPTR_0007s11460 I 0.717
OGLUM01G44190 Oryza glumaepatula OGLUM01G44190 I 0.717
F775_20715 Aegilops tauschii F775_20715 I 0.717
GLYMA11G17890 Glycine max GLYMA11G17890 I 0.717
Cagra.20099s0001 Capsella grandiflora Cagra.20099s0001 I 0.717
Carubv10026811m.g Capsella rubella Carubv10026811m.g I 0.717
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.717
PRUPE_ppa026393mg Prunus persica PRUPE_ppa026393mg I 0.717
gene24088-v1.0-hybrid Fragaria vesca gene24088-v1.0-hybrid I 0.717
Pm026450 Prunus mume Pm026450 I 0.717
ORUFI01G43320 Oryza rufipogon ORUFI01G43320 I 0.717
Ciclev10027275m.g Citrus clementina Ciclev10027275m.g I 0.717
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.717
Cucsa.250570 Cucumis sativus Cucsa.250570 I 0.717
BRADI2G57380 Brachypodium distachyon BRADI2G57380 I 0.717
OMERI01G36900 Oryza meridionalis OMERI01G36900 I 0.717
TRAES3BF084400010CFD_g Triticum aestivum TRAES3BF084400010CFD_g I 0.717
OBART01G39990 Oryza barthii OBART01G39990 I 0.717
Si024114m.g Setaria italica Si024114m.g I 0.717
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.717
Bostr.0568s0111 Boechera stricta Bostr.0568s0111 I 0.717
OLONG_016086 Oryza longistaminata OLONG_016086 I 0.717
gw1.7.209.1 Physcomitrella patens gw1.7.209.1 I 0.713
mgf004296m Mimulus guttatus mgf004296m I 0.707
ASL1 Arabidopsis lyrata fgenesh2_kg.8__2729__AT5G66870.1 I 0.707
cassava16846.m1 Manihot esculenta cassava16846.m1 I 0.707
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.707
TRIUR3_23928 Triticum urartu TRIUR3_23928 I 0.707
cassava32691.m1 Manihot esculenta cassava32691.m1 I 0.707
Sb09g020440 Sorghum bicolor Sb09g020440 I 0.707
Traes_4BS_C1F4F41E9 Triticum aestivum Traes_4BS_C1F4F41E9 I 0.707
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.707
VIT_00s1247g00010 Vitis vinifera VIT_00s1247g00010 I 0.707
Sb01g014650 Sorghum bicolor Sb01g014650 I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
29676.m001633 Ricinus communis 29676.m001633 I 0.707
Lus10022463.g Linum usitatissimum Lus10022463.g I 0.707
Si037583m.g Setaria italica Si037583m.g I 0.707
Traes_4DS_72ABC3EE5 Triticum aestivum Traes_4DS_72ABC3EE5 I 0.707
Lus10016769.g Linum usitatissimum Lus10016769.g I 0.707
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.707
GSMUA_Achr6G04670_001 Musa acuminata GSMUA_Achr6G04670_001 I 0.707
POPTR_0005s14150 Populus trichocarpa POPTR_0005s14150 I 0.707
Lus10005313.g Linum usitatissimum Lus10005313.g I 0.707
LPERR03G21590 Leersia perrieri LPERR03G21590 I 0.707
MDP0000562305 Malus domestica MDP0000562305 I 0.707
Pavir.J03307 Panicum virgatum Pavir.J03307 I 0.707
Pavir.J09541 Panicum virgatum Pavir.J09541 I 0.707
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.707
Pavir.Ib03943 Panicum virgatum Pavir.Ib03943 I 0.707
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.707
GRMZM2G362627 Zea mays GRMZM2G362627 I 0.707
VIT_16s0022g02050 Vitis vinifera VIT_16s0022g02050 I 0.707
MTR_3g073690 Medicago truncatula MTR_3g073690 I 0.707
VIT_07s0197g00020 Vitis vinifera VIT_07s0197g00020 I 0.707