SapurV1A.1704s0040 (Salix purpurea)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 SapurV1A.1704s0040 T247307_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD16
M00870_2.00
Arabidopsis thaliana
DNHHYVCGG

CCGBRDDNH
PBM
Franco-Zorrilla et al.(2014)
LBD16
0.787 0.787
LBD16
M06958_2.00
Arabidopsis thaliana
SCGGAAAWNVCGSMR

YKSCGBNWTTTCCGS
Dap-seq
OMalley et al.(2016)
ASL18_col_a
0.787 0.787
LBD16
M06959_2.00
Arabidopsis thaliana
SCDBDWTTYVCGSHDN

NHDSCGBRAAWHVHGS
Dap-seq
OMalley et al.(2016)
ASL18_colamp_a
0.787 0.787
LBD18
M06962_2.00
Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN

NHNNYKSCDBDWTYYCCGS
Dap-seq
OMalley et al.(2016)
LBD18_col_a
0.787 0.787
LBD18
M06963_2.00
Arabidopsis thaliana
CDBDWTTTMHGSHRN

NYDSCDKAAAWHVHG
Dap-seq
OMalley et al.(2016)
LBD18_colamp_a
0.787 0.787
LBD30
M01066_2.00
Arabidopsis thaliana
BVWWWHVNGG

CCNBDWWWBV
PBM
Sullivan et al.(2014)
pTH7467
0.753 0.753
LBD30
M01067_2.00
Arabidopsis thaliana
VWWWNVNGGD

HCCNBNWWWB
PBM
Sullivan et al.(2014)
pTH7616
0.753 0.753
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.1704s0040.1.p LOB 41 130

Links

Other LOB family TFs
Other Salix purpurea TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.944
TCM_025849 Theobroma cacao TCM_025849 I 0.921
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.921
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.921
Pm028642 Prunus mume Pm028642 I 0.921
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.910
LBD20 Arabidopsis thaliana AT3G03760 I 0.910
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.910
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.910
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.910
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.910
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.910
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I 0.899
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.899
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.876
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.876
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.869
Cla002965 Citrullus lanatus Cla002965 I 0.865
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I 0.865
Ca_19716 Cicer arietinum Ca_19716 I 0.854
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.848
GLYMA02G27230 Glycine max GLYMA02G27230 I 0.843
GLYMA10G11031 Glycine max GLYMA10G11031 I 0.843
MDP0000322059 Malus domestica MDP0000322059 I 0.838
30072.m000955 Ricinus communis 30072.m000955 I 0.838
Bo1g153580 Brassica oleracea Bo1g153580 I 0.818
Bra036436 Brassica rapa Bra036436 I 0.818
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I 0.818
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.818
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.816
chr2.LjT13P17.280.nd Lotus japonicus chr2.LjT13P17.280.nd I 0.809
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.798
mgf006429m Mimulus guttatus mgf006429m I 0.798
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.798
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.798
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.798
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I 0.793
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I 0.793
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.787
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.787
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.787
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.787
OBART03G10450 Oryza barthii OBART03G10450 I 0.787
OS03G0246900 Oryza sativa OS03G0246900 I 0.787
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.787
LBD16 Arabidopsis thaliana AT2G42430 D 0.787
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.787
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.787
Bo4g024620 Brassica oleracea Bo4g024620 I 0.787
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.787
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.787
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.787
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.787
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.787
Bra004910 Brassica rapa Bra004910 I 0.787
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.787
MDP0000254224 Malus domestica MDP0000254224 I 0.787
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.787
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.787
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.787
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.784
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.775
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.775
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I 0.775
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.775
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.775
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.775
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.775
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.775
POPTR_0014s06590 Populus trichocarpa POPTR_0014s06590 I 0.775
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.775
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.775
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.775
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.775
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.775
Bra016877 Brassica rapa Bra016877 I 0.775
OB03G20590 Oryza brachyantha OB03G20590 I 0.775
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.775
Bo4g195520 Brassica oleracea Bo4g195520 I 0.775
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I 0.775
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.764
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.764
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.764
Pm020628 Prunus mume Pm020628 I 0.764
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.764
Pm020629 Prunus mume Pm020629 I 0.764
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.764
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.764
mgf020773m Mimulus guttatus mgf020773m I 0.764
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.764
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I 0.764
Bra000257 Brassica rapa Bra000257 I 0.764
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.764
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.764
Bo3g036030 Brassica oleracea Bo3g036030 I 0.764
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.764
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.764
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.764
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.764
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.764
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.764
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.764
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.764
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.764
Eucgr.K01522 Eucalyptus grandis Eucgr.K01522 I 0.758
Cucsa.338130 Cucumis sativus Cucsa.338130 I 0.758
GLYMA19G30200 Glycine max GLYMA19G30200 I 0.758
LBD30 Arabidopsis lyrata fgenesh2_kg.6__3680__AT4G00220.1 I 0.753
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.753
OB10G12360 Oryza brachyantha OB10G12360 I 0.753
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.753
29883.m002035 Ricinus communis 29883.m002035 I 0.753
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I 0.753
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.753
MDP0000145761 Malus domestica MDP0000145761 I 0.753
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.753
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.753
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.753
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I 0.753
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.753
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.753
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.753
LBD30 Arabidopsis thaliana AT4G00220 D 0.753
Sb01g024400 Sorghum bicolor Sb01g024400 I 0.753
TCM_005496 Theobroma cacao TCM_005496 I 0.750
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.745
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.742
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.742
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.742
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.742
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.742
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I 0.742
Cucsa.388160 Cucumis sativus Cucsa.388160 I 0.742
Thhalv10028937m.g Eutrema salsugineum Thhalv10028937m.g I 0.742
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.742
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.742
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.742
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.742
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.742
OB08G30680 Oryza brachyantha OB08G30680 I 0.742
MDP0000159122 Malus domestica MDP0000159122 I 0.742
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I 0.742
F775_02052 Aegilops tauschii F775_02052 I 0.742
Pm020627 Prunus mume Pm020627 I 0.742
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.733
Bo3g036000 Brassica oleracea Bo3g036000 I 0.731
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.730
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.730
OS02G0820500 Oryza sativa OS02G0820500 I 0.730
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.730
Si015156m.g Setaria italica Si015156m.g I 0.730
Lus10000707.g Linum usitatissimum Lus10000707.g I 0.730
OLONG_028429 Oryza longistaminata OLONG_028429 I 0.730
Lus10014757.g Linum usitatissimum Lus10014757.g I 0.730
Bo8g092560 Brassica oleracea Bo8g092560 I 0.730
MDP0000429067 Malus domestica MDP0000429067 I 0.730
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.730
OB02G44330 Oryza brachyantha OB02G44330 I 0.730
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.730
Si019578m.g Setaria italica Si019578m.g I 0.730
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.730
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.730
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I 0.730
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.730
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.730
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.730
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.730
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.730
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.730
Cucsa.362830 Cucumis sativus Cucsa.362830 I 0.730
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.730
MTR_6g027710 Medicago truncatula MTR_6g027710 I 0.727
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.727
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.727
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.723
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I 0.719
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I 0.719
GLYMA18G45320 Glycine max GLYMA18G45320 I 0.719
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.719
Pm017935 Prunus mume Pm017935 I 0.719
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I 0.719
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.719
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I 0.719
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.719
Bo9g002150 Brassica oleracea Bo9g002150 I 0.719
Lus10033872.g Linum usitatissimum Lus10033872.g I 0.719
OLONG_020841 Oryza longistaminata OLONG_020841 I 0.719
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.719
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.719
Bo4g108600 Brassica oleracea Bo4g108600 I 0.719
F775_22967 Aegilops tauschii F775_22967 I 0.719
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I 0.719
Bra037322 Brassica rapa Bra037322 I 0.719
POPTR_0047s00280 Populus trichocarpa POPTR_0047s00280 I 0.718
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.708
PK25573.1 Cannabis sativa PK25573.1 I 0.708
cassava28672.m1 Manihot esculenta cassava28672.m1 I 0.708
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I 0.708
Traes_6AS_4EEA3E388 Triticum aestivum Traes_6AS_4EEA3E388 I 0.708
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.708
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I 0.708
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.708
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.708
POPTR_0014s06580 Populus trichocarpa POPTR_0014s06580 I 0.708
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.708
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I 0.708
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.708
GSMUA_Achr3G27340_001 Musa acuminata GSMUA_Achr3G27340_001 I 0.708
Bostr.25993s0537 Boechera stricta Bostr.25993s0537 I 0.708
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.707
LBD18 Arabidopsis thaliana AT2G45420 D 0.707
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.707
Pavir.Ib02517 Panicum virgatum Pavir.Ib02517 I 0.707
Bo4g191530 Brassica oleracea Bo4g191530 I 0.707
Bo4g016000 Brassica oleracea Bo4g016000 I 0.707
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.707
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.707
Pm017936 Prunus mume Pm017936 I 0.707
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.707
30174.m008898 Ricinus communis 30174.m008898 I 0.707
Cla007068 Citrullus lanatus Cla007068 I 0.707
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.707
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.707
Ca_07763 Cicer arietinum Ca_07763 I 0.707
Ca_12213 Cicer arietinum Ca_12213 I 0.707
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.707
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.707
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.707
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.707
Bra004693 Brassica rapa Bra004693 I 0.707
Bra040311 Brassica rapa Bra040311 I 0.707
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.707
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.707
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.707
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.707
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.707
TCM_004103 Theobroma cacao TCM_004103 I 0.705