CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10000537m.g
(
Eutrema salsugineum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Thhalv10000537m.g
T247320_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10000537m
LOB
2
86
RFAPYFPSTEPENFDRVHRNFGAENVYKILSNETFSPLQREYAVKALSYEAEARIQDPVTGCVGMSLAYKKILNNLKEQIVSTKN
Links
Other
LOB
family TFs
Other
Eutrema salsugineum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10000718m.g
Eutrema salsugineum
Thhalv10000718m.g
N
0.916
Thhalv10000430m.g
Eutrema salsugineum
Thhalv10000430m.g
N
0.904
Thhalv10027114m.g
Eutrema salsugineum
Thhalv10027114m.g
N
0.867
Thhalv10000672m.g
Eutrema salsugineum
Thhalv10000672m.g
N
0.788
Thhalv10000419m.g
Eutrema salsugineum
Thhalv10000419m.g
N
0.788
Thhalv10000561m.g
Eutrema salsugineum
Thhalv10000561m.g
N
0.778
Thhalv10000593m.g
Eutrema salsugineum
Thhalv10000593m.g
N
0.768
Thhalv10000641m.g
Eutrema salsugineum
Thhalv10000641m.g
N
0.768
Thhalv10000522m.g
Eutrema salsugineum
Thhalv10000522m.g
N
0.758
Thhalv10027063m.g
Eutrema salsugineum
Thhalv10027063m.g
N
0.727
Thhalv10026904m.g
Eutrema salsugineum
Thhalv10026904m.g
N
0.727
Thhalv10000489m.g
Eutrema salsugineum
Thhalv10000489m.g
N
0.711