Thhalv10001778m.g (Eutrema salsugineum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Thhalv10001778m.g T247328_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD19
M06960_2.00
Arabidopsis thaliana
CCKKAAAWHMMGSND

HNSCKKDWTTTMMGG
Dap-seq
OMalley et al.(2016)
LBD19_col_a
0.919 0.919
LBD19
M06961_2.00
Arabidopsis thaliana
WWYCCGG

CCGGRWW
Dap-seq
OMalley et al.(2016)
LBD19_colamp_a
0.919 0.919
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10001778m LOB 16 115

Links

Other LOB family TFs
Other Eutrema salsugineum TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG021728.1 Alligator sinensis Alligator_sinensis_CCG021728.1 N 0.000
ENSACAG00000001074 Anolis carolinensis ENSACAG00000001074 N 0.000
ENSAMXG00000025035 Astyanax mexicanus ENSAMXG00000025035 N 0.000
ENSP00000360069-D1 Bos grunniens ENSP00000360069-D1 N 0.000
ZNF831 Bos taurus ENSBTAG00000011940 N 0.000
Brh_R000153 Buceros rhinoceros Brh_R000153 N 0.000
Aan_R015780 Calypte anna Aan_R015780 N 0.000
ZNF831 Canis familiaris ENSCAFG00000012242 N 0.000
ZNF831 Cavia porcellus ENSCPOG00000004730 N 0.000
Cmyd_10020478 Chelonia mydas Cmyd_10020478 N 0.000
ENSCSAG00000015605 Chlorocebus sabaeus ENSCSAG00000015605 N 0.000
ZNF831 Dasypus novemcinctus ENSDNOG00000039522 N 0.000
ENSDORG00000000484 Dipodomys ordii ENSDORG00000000484 N 0.000
ZNF831 Equus caballus ENSECAG00000004219 N 0.000
ZNF831 Felis catus ENSFCAG00000000850 N 0.000
ENSFALG00000010699 Ficedula albicollis ENSFALG00000010699 N 0.000
ENSGMOG00000017750 Gadus morhua ENSGMOG00000017750 N 0.000
ENSGACG00000011250 Gasterosteus aculeatus ENSGACG00000011250 N 0.000
Gfo_R009549 Geospiza fortis Gfo_R009549 N 0.000
ZNF831 Gorilla gorilla ENSGGOG00000016623 N 0.000
ZNF831 Homo sapiens ENSG00000124203 N 0.000
ENSSTOG00000020220 Ictidomys tridecemlineatus ENSSTOG00000020220 N 0.000
ZNF831 Loxodonta africana ENSLAFG00000027534 N 0.000
ENSP00000360069 Macaca fascicularis ENSP00000360069 N 0.000
ENSMEUG00000011902 Macropus eugenii ENSMEUG00000011902 N 0.000
ENSMGAG00000015550 Meleagris gallopavo ENSMGAG00000015550 N 0.000
ENSMPUG00000007096 Mustela putorius furo ENSMPUG00000007096 N 0.000
Zfp831 Mus musculus ENSMUSG00000050600 N 0.000
Myotis_brandtii_ZNF831_10023550 Myotis brandtii Myotis_brandtii_ZNF831_10023550 N 0.000
ZNF831 Myotis lucifugus ENSMLUG00000002710 N 0.000
ENSNLEG00000009590 Nomascus leucogenys ENSNLEG00000009590 N 0.000
Ogr15311 Ophisaurus gracilis Ogr15311 N 0.000
ZNF831 Oryctolagus cuniculus ENSOCUG00000016865 N 0.000
ZNF831 Otolemur garnettii ENSOGAG00000026401 N 0.000
ENSOARG00000016025 Ovis aries ENSOARG00000016025 N 0.000
ZNF831 Pan troglodytes ENSPTRG00000013683 N 0.000
ENSPANG00000000370 Papio anubis ENSPANG00000000370 N 0.000
ENSPSIG00000005947 Pelodiscus sinensis ENSPSIG00000005947 N 0.000
ENSPFOG00000008819 Poecilia formosa ENSPFOG00000008819 N 0.000
Pvit_17317 Pogona vitticeps Pvit_17317 N 0.000
ENSPPYG00000011183 Pongo abelii ENSPPYG00000011183 N 0.000
ZNF831 Pteropus vampyrus ENSPVAG00000005227 N 0.000
Zfp831 Rattus norvegicus ENSRNOG00000024693 N 0.000
ENSSHAG00000011841 Sarcophilus harrisii ENSSHAG00000011841 N 0.000
ZNF831 Sus scrofa ENSSSCG00000007526 N 0.000
ENSTGUG00000008011 Taeniopygia guttata ENSTGUG00000008011 N 0.000
ZNF831 Tursiops truncatus ENSTTRG00000009388 N 0.000
Tal_R006729 Tyto alba Tal_R006729 N 0.000
ENSXMAG00000013985 Xiphophorus maculatus ENSXMAG00000013985 N 0.000