PK04548.1 (Cannabis sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PK04548.1 T247377_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK04548.1 LOB 46 148

Links

Other LOB family TFs
Other Cannabis sativa TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_012338 Theobroma cacao TCM_012338 N 0.816
PK03169.1 Cannabis sativa PK03169.1 N 0.816
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.806
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.798
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N 0.798
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N 0.798
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.796
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.796
Cla007208 Citrullus lanatus Cla007208 N 0.796
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.796
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.796
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.796
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.796
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.796
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.796
TCM_019459 Theobroma cacao TCM_019459 N 0.796
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.796
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.796
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N 0.796
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.786
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.786
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.786
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.786
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.786
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.778
MDP0000136037 Malus domestica MDP0000136037 N 0.778
gene10300-v1.0-hybrid Fragaria vesca gene10300-v1.0-hybrid N 0.778
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.776
mgf011656m Mimulus guttatus mgf011656m N 0.776
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.776
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.776
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.776
Cucsa.199060 Cucumis sativus Cucsa.199060 N 0.776
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.776
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.776
Cla019264 Citrullus lanatus Cla019264 N 0.776
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.776
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.776
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.776
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.776
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.776
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N 0.768
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.768
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N 0.768
LBD40 Arabidopsis thaliana AT1G67100 N 0.768
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.768
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.765
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.765
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.765
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.765
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.765
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.765
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N 0.758
Bostr.26959s0198 Boechera stricta Bostr.26959s0198 N 0.758
mgf010898m Mimulus guttatus mgf010898m N 0.755
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.755
28207.m000107 Ricinus communis 28207.m000107 N 0.755
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.755
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N 0.755
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.755
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N 0.755
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.755
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.750
Bo2g055410 Brassica oleracea Bo2g055410 N 0.747
Pm029059 Prunus mume Pm029059 N 0.745
cassava38982.m1 Manihot esculenta cassava38982.m1 N 0.745
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.745
Bostr.2902s0344 Boechera stricta Bostr.2902s0344 N 0.745
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N 0.745
Bra021433 Brassica rapa Bra021433 N 0.745
Bo3g055690 Brassica oleracea Bo3g055690 N 0.745
Thhalv10021328m.g Eutrema salsugineum Thhalv10021328m.g N 0.737
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.737
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N 0.735
LBD41 Arabidopsis thaliana AT3G02550 N 0.735
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N 0.735
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N 0.735
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.735
Pavir.J11724 Panicum virgatum Pavir.J11724 N 0.735
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.735
Bostr.1460s0172 Boechera stricta Bostr.1460s0172 N 0.727
Bo1g156310 Brassica oleracea Bo1g156310 N 0.727
Cagra.1194s0049 Capsella grandiflora Cagra.1194s0049 N 0.727
Carubv10015363m.g Capsella rubella Carubv10015363m.g N 0.727
Cucsa.283560 Cucumis sativus Cucsa.283560 N 0.724
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.724
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.724
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.724
OBART01G01940 Oryza barthii OBART01G01940 N 0.724
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N 0.724
OMERI01G01380 Oryza meridionalis OMERI01G01380 N 0.724
ONIVA01G02110 Oryza nivara ONIVA01G02110 N 0.724
OB01G11830 Oryza brachyantha OB01G11830 N 0.724
LPERR01G01830 Leersia perrieri LPERR01G01830 N 0.724
BGIOSGA002703 Oryza indica BGIOSGA002703 N 0.724
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.724
Thhalv10019494m.g Eutrema salsugineum Thhalv10019494m.g N 0.724
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N 0.724
OPUNC01G01670 Oryza punctata OPUNC01G01670 N 0.724
LjSGA_023437.1 Lotus japonicus LjSGA_023437.1 N 0.724
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.724
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N 0.724
MDP0000233303 Malus domestica MDP0000233303 N 0.724
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N 0.724
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N 0.724
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N 0.724
TCM_009888 Theobroma cacao TCM_009888 N 0.724
mgf021653m Mimulus guttatus mgf021653m N 0.722
PK04625.1 Cannabis sativa PK04625.1 N 0.721
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.717
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.717
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.717
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.717
Ca_22996 Cicer arietinum Ca_22996 N 0.717
LBD42 Arabidopsis thaliana AT1G68510 N 0.714
Pavir.J01483 Panicum virgatum Pavir.J01483 N 0.714
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.714
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.714
OBART01G17510 Oryza barthii OBART01G17510 N 0.714
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.714
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.714
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.714
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N 0.714
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.714
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.714
Cla020705 Citrullus lanatus Cla020705 N 0.714
27524.m000293 Ricinus communis 27524.m000293 N 0.714
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.714
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.714
OS01G0511000 Oryza sativa OS01G0511000 N 0.714
Si002412m.g Setaria italica Si002412m.g N 0.714
Bra004315 Brassica rapa Bra004315 N 0.711
Bo6g106960 Brassica oleracea Bo6g106960 N 0.711
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N 0.711
Carubv10022391m.g Capsella rubella Carubv10022391m.g N 0.711
Cagra.6845s0054 Capsella grandiflora Cagra.6845s0054 N 0.707
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N 0.706
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.704
Si022660m.g Setaria italica Si022660m.g N 0.704
mgf017960m Mimulus guttatus mgf017960m N 0.704
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.704
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.704
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.704