PK04625.1 (Cannabis sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PK04625.1 T247378_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK04625.1 LOB 3 50

Links

Other LOB family TFs
Other Cannabis sativa TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27524.m000293 Ricinus communis 27524.m000293 N 0.884
28207.m000107 Ricinus communis 28207.m000107 N 0.837
AC234149.1_FG002 Zea mays AC234149.1_FG002 N 0.791
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.791
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.814
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.814
LBD40 Arabidopsis thaliana AT1G67100 N 0.791
LBD42 Arabidopsis thaliana AT1G68510 N 0.860
LBD41 Arabidopsis thaliana AT3G02550 N 0.814
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.814
BGIOSGA002703 Oryza indica BGIOSGA002703 N 0.860
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.744
Bo1g156310 Brassica oleracea Bo1g156310 N 0.837
Bo2g055410 Brassica oleracea Bo2g055410 N 0.791
Bo3g055690 Brassica oleracea Bo3g055690 N 0.837
Bo6g106960 Brassica oleracea Bo6g106960 N 0.860
Bo7g118580 Brassica oleracea Bo7g118580 N 0.721
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.860
Bostr.26959s0198 Boechera stricta Bostr.26959s0198 N 0.791
Bostr.2902s0344 Boechera stricta Bostr.2902s0344 N 0.791
Bra004315 Brassica rapa Bra004315 N 0.860
Bra021433 Brassica rapa Bra021433 N 0.837
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N 0.837
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N 0.837
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.721
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N 0.860
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.791
Cagra.6845s0054 Capsella grandiflora Cagra.6845s0054 N 0.791
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.791
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.791
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.721
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.791
Carubv10022391m.g Capsella rubella Carubv10022391m.g N 0.860
cassava38982.m1 Manihot esculenta cassava38982.m1 N 0.907
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N 0.907
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.814
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.814
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.721
Ca_05488 Cicer arietinum Ca_05488 N 0.814
Ca_09342 Cicer arietinum Ca_09342 N 0.721
Ca_22996 Cicer arietinum Ca_22996 N 0.837
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N 0.814
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N 0.721
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.791
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N 0.814
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.791
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.721
Cla007208 Citrullus lanatus Cla007208 N 0.814
Cla019264 Citrullus lanatus Cla019264 N 0.814
Cla020705 Citrullus lanatus Cla020705 N 0.837
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.814
Cucsa.199060 Cucumis sativus Cucsa.199060 N 0.814
Cucsa.283560 Cucumis sativus Cucsa.283560 N 0.837
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N 0.814
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N 0.860
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N 0.721
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.860
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.837
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.814
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N 0.860
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.837
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.860
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.860
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N 0.814
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.744
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.837
GLYMA07G10180 Glycine max GLYMA07G10180 N 0.744
GLYMA08G31143 Glycine max GLYMA08G31143 N 0.814
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.814
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.721
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.837
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.721
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.744
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.814
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.837
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.744
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.884
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N 0.837
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.791
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.721
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.837
GRMZM2G073044 Zea mays GRMZM2G073044 N 0.814
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.837
GRMZM2G386674 Zea mays GRMZM2G386674 N 0.837
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N 0.744
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.814
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N 0.860
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.814
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.721
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.860
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.837
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.814
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.814
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.860
LjSGA_023437.1 Lotus japonicus LjSGA_023437.1 N 0.791
LPERR01G01830 Leersia perrieri LPERR01G01830 N 0.860
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.814
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.744
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.721
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.721
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.860
MDP0000136037 Malus domestica MDP0000136037 N 0.767
MDP0000139025 Malus domestica MDP0000139025 N 0.721
MDP0000233303 Malus domestica MDP0000233303 N 0.837
MDP0000247079 Malus domestica MDP0000247079 N 0.721
MDP0000261146 Malus domestica MDP0000261146 N 0.721
MDP0000487015 Malus domestica MDP0000487015 N 0.744
MDP0000747679 Malus domestica MDP0000747679 N 0.744
MDP0000794101 Malus domestica MDP0000794101 N 0.767
mgf010898m Mimulus guttatus mgf010898m N 0.884
mgf011656m Mimulus guttatus mgf011656m N 0.814
mgf016064m Mimulus guttatus mgf016064m N 0.721
mgf017960m Mimulus guttatus mgf017960m N 0.837
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.814
MTR_1g110840 Medicago truncatula MTR_1g110840 N 0.884
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.860
MTR_6g054080 Medicago truncatula MTR_6g054080 N 0.767
MTR_6g054150 Medicago truncatula MTR_6g054150 N 0.791
MTR_6g453130 Medicago truncatula MTR_6g453130 N 0.884
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.814
OB01G11830 Oryza brachyantha OB01G11830 N 0.860
OB01G27020 Oryza brachyantha OB01G27020 N 0.814
OB03G31560 Oryza brachyantha OB03G31560 N 0.744
OBART01G01940 Oryza barthii OBART01G01940 N 0.860
OBART01G17510 Oryza barthii OBART01G17510 N 0.814
OBART03G22820 Oryza barthii OBART03G22820 N 0.744
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N 0.860
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.814
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.744
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.744
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.814
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.744
ONIVA01G02110 Oryza nivara ONIVA01G02110 N 0.860
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.814
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.744
OPUNC01G01670 Oryza punctata OPUNC01G01670 N 0.860
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.814
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.744
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.791
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.721
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N 0.721
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.791
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.791
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N 0.860
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.744
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N 0.860
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.814
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.744
OS01G0511000 Oryza sativa OS01G0511000 N 0.814
OS03G0445700 Oryza sativa OS03G0445700 N 0.744
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.837
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N 0.837
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.814
Pavir.J11724 Panicum virgatum Pavir.J11724 N 0.860
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.721
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.767
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.814
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N 0.791
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.721
PK03169.1 Cannabis sativa PK03169.1 N 0.791
PK04548.1 Cannabis sativa PK04548.1 N 0.721
Pm005389 Prunus mume Pm005389 N 0.721
Pm015540 Prunus mume Pm015540 N 0.791
Pm021281 Prunus mume Pm021281 N 0.721
Pm029059 Prunus mume Pm029059 N 0.837
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.814
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.791
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.884
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.837
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N 0.791
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.837
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.721
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N 0.721
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N 0.814
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.860
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.791
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.721
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.860
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.837
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.837
Sb09g025700 Sorghum bicolor Sb09g025700 N 0.791
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.721
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.721
Si002412m.g Setaria italica Si002412m.g N 0.814
Si004887m.g Setaria italica Si004887m.g N 0.837
Si022660m.g Setaria italica Si022660m.g N 0.814
Si037346m.g Setaria italica Si037346m.g N 0.721
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.814
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.721
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.767
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N 0.791
TCM_009888 Theobroma cacao TCM_009888 N 0.884
TCM_012338 Theobroma cacao TCM_012338 N 0.791
TCM_019459 Theobroma cacao TCM_019459 N 0.814
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N 0.767
Thhalv10021328m.g Eutrema salsugineum Thhalv10021328m.g N 0.814
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.791
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.791
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.814
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.721
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.814
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.814
Traes_4BL_7F70575F9 Triticum aestivum Traes_4BL_7F70575F9 N 0.814
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.791
Traes_4DL_E0847FBC5 Triticum aestivum Traes_4DL_E0847FBC5 N 0.837
Traes_5BL_3EEBE3D51 Triticum aestivum Traes_5BL_3EEBE3D51 N 0.814
Traes_5BS_3EEBE3D51 Triticum aestivum Traes_5BS_3EEBE3D51 N 0.814
VIT_01s0011g03530 Vitis vinifera VIT_01s0011g03530 N 0.814
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.837
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.837
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N 0.791