CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK17019.1
(
Cannabis sativa
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
PK17019.1
T247387_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.912
0.912
gw1.238.28.1
M02262_2.00
Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN
PBM
Weirauch et al.(2014)
pTH8459
0.824
0.824
LOB
M06966_2.00
Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN
Dap-seq
OMalley et al.(2016)
LOB_col_a
0.794
0.794
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK17019.1
LOB
1
34
QELPLHQRADAVSSLVYEANARVRDPVYGCVGAI
Links
Other
LOB
family TFs
Other
Cannabis sativa
TFs
291 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy