PDK_20s1448121g001 (Phoenix dactylifera)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PDK_20s1448121g001 T247463_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1448121g001 LOB 25 84

Links

Other LOB family TFs
Other Phoenix dactylifera TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N 0.797
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.797
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.763
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.763
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.763
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.763
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.763
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.763
TCM_045438 Theobroma cacao TCM_045438 I 0.763
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.763
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.763
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.763
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.763
Bra004572 Brassica rapa Bra004572 I 0.763
Bo4g012620 Brassica oleracea Bo4g012620 I 0.763
LBD15 Arabidopsis thaliana AT2G40470 I 0.763
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.763
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.746
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.746
Bo3g034980 Brassica oleracea Bo3g034980 I 0.746
Si012018m.g Setaria italica Si012018m.g I 0.746
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.746
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.746
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.746
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.746
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.746
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.746
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.746
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.746
F775_25790 Aegilops tauschii F775_25790 I 0.746
Bra000188 Brassica rapa Bra000188 I 0.746
Bo4g190210 Brassica oleracea Bo4g190210 I 0.746
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.746
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.746
Bo4g190140 Brassica oleracea Bo4g190140 I 0.737
Pm019028 Prunus mume Pm019028 I 0.729
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.729
Ca_04126 Cicer arietinum Ca_04126 I 0.729
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.729
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.729
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.729
Cla007391 Citrullus lanatus Cla007391 I 0.729
MDP0000278334 Malus domestica MDP0000278334 I 0.729
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.729
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.729
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.729
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.729
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.729
OBART01G35680 Oryza barthii OBART01G35680 I 0.729
OBART05G04570 Oryza barthii OBART05G04570 I 0.729
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.729
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.729
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.729
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.729
Bra016992 Brassica rapa Bra016992 I 0.729
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.729
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.729
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.729
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.729
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.729
OS01G0825000 Oryza sativa OS01G0825000 I 0.729
OS05G0165450 Oryza sativa OS05G0165450 I 0.729
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.729
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.729
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.729
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.729
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.729
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.729
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.729
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.712
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.712
LjSGA_040320.1 Lotus japonicus LjSGA_040320.1 I 0.712
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.712
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.712
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.712
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.712
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.712
OB01G44400 Oryza brachyantha OB01G44400 I 0.712
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.712
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.712
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.712
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.712
F775_52636 Aegilops tauschii F775_52636 I 0.712
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.712
Si004575m.g Setaria italica Si004575m.g I 0.712
TCM_042262 Theobroma cacao TCM_042262 I 0.712
mgf011471m Mimulus guttatus mgf011471m I 0.712
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.712
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.712
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.712
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.712
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.712
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.712