AMTR_s00002p00271480 (Amborella trichopoda)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 AMTR_s00002p00271480 T247836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN01551 MADF 119 186
ERN01551 MADF 416 489

Links

Other MADF family TFs
Other Amborella trichopoda TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.845
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.842
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.839
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.838
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.838
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.835
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.834
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.830
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.830
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.829
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.829
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.829
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.828
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.827
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.826
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.823
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.822
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.822
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.822
Ca_04386 Cicer arietinum Ca_04386 I 0.822
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.822
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.822
TCM_035565 Theobroma cacao TCM_035565 I 0.819
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.819
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.818
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.818
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.817
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.815
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.815
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.814
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.814
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.813
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.813
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.813
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.812
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.812
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.812
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.812
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.812