AT-GTL1 (Arabidopsis thaliana)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 AT1G33240 T247877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00		 Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a		 (Direct) (Direct)
AT-GTL1
M06969_2.00		 Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G33240.1 MADF 76 147
AT1G33240.1 MADF 449 521
AT1G33240.2 MADF 60 108
AT1G33240.2 MADF 410 482
AT1G33240.3 MADF 76 147
AT1G33240.3 MADF 449 521

Links

Other MADF family TFs
Other Arabidopsis thaliana TFs

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187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action