BGIOSGA016339 (Oryza indica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 BGIOSGA016339 T247945_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G10030
M01258_2.00
Arabidopsis thaliana
NRMCGTTAWNN

NNWTAACGKYN
PBM
Lambert et al.(2019)
pTH11538
0.872 0.686
AT3G10030
M06971_2.00
Arabidopsis thaliana
HRHCKCCGTTANND

HNNTAACGGMGDYD
Dap-seq
OMalley et al.(2016)
AT3G10030_col_a
0.872 0.686
AT3G10030
M06972_2.00
Arabidopsis thaliana
HWRHMKCCGTTAAHD

HDTTAACGGMKDYWD
Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a
0.872 0.686
PK04914.1
M01262_2.00
Cannabis sativa
DCCGTYAN

NTRACGGH
PBM
Lambert et al.(2019)
pTH10098
0.825 0.614
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA016339-PA MADF 102 181

Links

Other MADF family TFs
Other Oryza indica TFs

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65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action