CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra021534
(
Brassica rapa
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
Bra021534
T248025_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ASIL2
M06973_2.00
Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA
Dap-seq
OMalley et al.(2016)
At3g14180_col
0.878
0.769
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra021534.1-P
MADF
75
149
AWGEIHLELSRGNLKQKHWEKVAETVRSKEEDNGKTPKTDVQCKNRIDTVKKKYKQEKLRSGRSSWVFFDKLDRL
Links
Other
MADF
family TFs
Other
Brassica rapa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy