Bra034866 (Brassica rapa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bra034866 T248032_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G05550
M06978_2.00
Arabidopsis thaliana
HNDYCGCCGGMRWND

HNWYKCCGGCGRHND
Dap-seq
OMalley et al.(2016)
AT5G05550_col_a
0.947 0.791
AT5G05550
M06979_2.00
Arabidopsis thaliana
HYNYCGCCGGARWHD

HDWYTCCGGCGRNRD
Dap-seq
OMalley et al.(2016)
AT5G05550_colamp_a
0.947 0.791
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra034866.1-P MADF 35 109

Links

Other MADF family TFs
Other Brassica rapa TFs

Invalid Input OrderBy

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action