BRADI5G17150 (Brachypodium distachyon)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 BRADI5G17150 T248049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.919 0.783
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.919 0.783
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G17150.1 MADF 101 172
BRADI5G17150.1 MADF 513 584

Links

Other MADF family TFs
Other Brachypodium distachyon TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.919
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.882
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.952
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.952
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.894
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.899
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.903
30206.m000769 Ricinus communis 30206.m000769 I 0.893
30068.m002635 Ricinus communis 30068.m002635 I 0.947
29576.m000223 Ricinus communis 29576.m000223 I 0.886
Pm024289 Prunus mume Pm024289 I 0.956
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.952
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.902
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.952
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.886
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.895
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.956
mgf021983m Mimulus guttatus mgf021983m I 0.897
mgf004276m Mimulus guttatus mgf004276m I 0.934
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.936
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.942
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.885
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.876
Pm022572 Prunus mume Pm022572 I 0.896
Pm022570 Prunus mume Pm022570 I 0.879
Pm001889 Prunus mume Pm001889 I 0.853
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.954
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.948
TCM_035571 Theobroma cacao TCM_035571 I 0.873
TCM_035565 Theobroma cacao TCM_035565 I 0.898
TCM_015563 Theobroma cacao TCM_015563 I 0.952
TCM_001348 Theobroma cacao TCM_001348 I 0.874
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.928
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.897
Si034382m.g Setaria italica Si034382m.g I 0.949
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.959
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.948
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.883
Cla007910 Citrullus lanatus Cla007910 I 0.879
Cla005046 Citrullus lanatus Cla005046 I 0.956
Cla001992 Citrullus lanatus Cla001992 I 0.876
Ca_25135 Cicer arietinum Ca_25135 I 0.894
Ca_04386 Cicer arietinum Ca_04386 I 0.901
Ca_04385 Cicer arietinum Ca_04385 I 0.885
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.918
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.873
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.947
Si016578m.g Setaria italica Si016578m.g I 0.881
PK26613.1 Cannabis sativa PK26613.1 I 0.849
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.932
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.940
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.958
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.896
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.876
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.907
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.882
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.959
MDP0000701272 Malus domestica MDP0000701272 I 0.955
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.953
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.888
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.873
PK24122.1 Cannabis sativa PK24122.1 I 0.892
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.895
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.922
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.901
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.877
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.882
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.901
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.951
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.880
MDP0000451107 Malus domestica MDP0000451107 I 0.902
MDP0000451038 Malus domestica MDP0000451038 I 0.959
MDP0000156139 Malus domestica MDP0000156139 I 0.906
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.913
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.876
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.959
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.907
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.882
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.895
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.882
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.922
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.915
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.893
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.944
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.959
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.889
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.878
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.862
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.937
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.864
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.947
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.904
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.891
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.883
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.895
OB02G33250 Oryza brachyantha OB02G33250 I 0.935
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.900
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.895
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.936
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.937
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.903
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.879
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.959
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.885
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.903
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.887
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.956
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.923
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.890
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.873
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.917
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.927
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.958
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.940
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.963
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.946
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.922
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.885
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.882
Bra003702 Brassica rapa Bra003702 I 0.847
Bo8g027460 Brassica oleracea Bo8g027460 I 0.892
Bo6g120870 Brassica oleracea Bo6g120870 I 0.895
Bo6g083690 Brassica oleracea Bo6g083690 I 0.895
Bo6g049430 Brassica oleracea Bo6g049430 I 0.926
Bo2g091240 Brassica oleracea Bo2g091240 I 0.864
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.945
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.964
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.933
Bra003703 Brassica rapa Bra003703 I 0.895
Bra008285 Brassica rapa Bra008285 I 0.885
Bra015716 Brassica rapa Bra015716 I 0.895
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.933
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.883
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.898
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.919
F775_26337 Aegilops tauschii F775_26337 I 0.959
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.942
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.908
Bra040010 Brassica rapa Bra040010 I 0.926
Bra036731 Brassica rapa Bra036731 I 0.897
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.951
Si012121m.g Setaria italica Si012121m.g I 0.962
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.959
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.892
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.897
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.894
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.956
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.880
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.897
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.945
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.885
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.897
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.956
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.896
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.914
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.901
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.901
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.914
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.895
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.959
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.898
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.943
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.868
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.964
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.948
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.933
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.945
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.943
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.963
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.945
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.964
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.943
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.933
OBART04G20290 Oryza barthii OBART04G20290 I 0.964
OBART02G25970 Oryza barthii OBART02G25970 I 0.927
OB04G27270 Oryza brachyantha OB04G27270 I 0.964
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.948
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.964
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.933
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.937
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.927
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.950
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.966
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.925
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.945
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.837
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.812
mgf018892m Mimulus guttatus mgf018892m N 0.869
mgf015314m Mimulus guttatus mgf015314m N 0.825
F775_24861 Aegilops tauschii F775_24861 N 0.866
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.844
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.817
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.816