CBG08311 (Caenorhabditis briggsae)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 CBG08311 T248061_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG08311
M02267_2.00
Caenorhabditis briggsae
RCGCGGAM

KTCCGCGY
PBM
Weirauch et al.(2014)
pTH9393
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
madf-9
M02277_2.00
Caenorhabditis elegans
VYGCGGAH

DTCCGCRB
PBM
Weirauch et al.(2014)
pTH8333
0.969 0.949
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02267_2.00 MADF 51 129

DNA Binding Domains

Protein ID Domain From To Sequence
CBG08311 MADF 55 133

Links

Other MADF family TFs
Other Caenorhabditis briggsae TFs

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20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action