CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG08311
(
Caenorhabditis briggsae
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
CBG08311
T248061_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG08311
M02267_2.00
Caenorhabditis briggsae
RCGCGGAM
KTCCGCGY
PBM
Weirauch et al.(2014)
pTH9393
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
madf-9
M02277_2.00
Caenorhabditis elegans
VYGCGGAH
DTCCGCRB
PBM
Weirauch et al.(2014)
pTH8333
0.969
0.949
For this family, TFs with SR scores >
0.812
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02267_2.00
MADF
51
129
LIAEVKARPFLYDQADEGYNLLSWRNSAWNEIAESLETTSEHVKTRWKTLRDRYKKEEKKERTSKKQSSWVFQRPLKFI
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG08311
MADF
55
133
LIAEVKARPFLYDQADEGYNLLSWRNSAWNEIAESLETTSEHVKTRWKTLRDRYKKEEKKERTSKKQSSWVFQRPLKFI
Links
Other
MADF
family TFs
Other
Caenorhabditis briggsae
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy