CBN17510 (Caenorhabditis brenneri)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 CBN17510 T248082_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
madf-5
M02276_2.00
Caenorhabditis elegans
NNDCCGGHNN

NNDCCGGHNN
PBM
Weirauch et al.(2014)
pTH9076
0.971 1.000
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN17510 MADF 11 93

Links

Other MADF family TFs
Other Caenorhabditis brenneri TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
madf-5 Caenorhabditis elegans WBGene00007242 D 0.971
CJA18506 Caenorhabditis japonica CJA18506 I 0.971
CRE26355 Caenorhabditis remanei CRE26355 I 0.971
CBN31453 Caenorhabditis brenneri CBN31453 I 0.971
CBG20858 Caenorhabditis briggsae CBG20858 I 0.955
OESDEN_17669 Oesophagostomum dentatum OESDEN_17669 I 0.871
DICVIV_11545 Dictyocaulus viviparus DICVIV_11545 I 0.858
TELCIR_10199 Teladorsagia circumcincta TELCIR_10199 I 0.858
ANCCAN_12875 Ancylostoma caninum ANCCAN_12875 I 0.858
NECAME_12942 Necator americanus NECAME_12942 I 0.858
SVUK_0001242901 Strongylus vulgaris SVUK_0001242901 I 0.857
CGOC_0000285301 Cylicostephanus goldi CGOC_0000285301 I 0.857
ACAC_0000281001 Angiostrongylus cantonensis ACAC_0000281001 I 0.847
HCOI02134900 Haemonchus contortus HCOI02134900 I 0.844
HPLM_0001751701 Haemonchus placei HPLM_0001751701 I 0.844
OESDEN_24138 Oesophagostomum dentatum OESDEN_24138 I 0.818