NAIF1 (Gallus gallus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ENSGALG00000027734 T248306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAIF1_CHICK
M01260_2.00
Gallus gallus
NNNDRCGTAN

NTACGYHNNN
PBM
Lambert et al.(2019)
pTH9808
0.971 0.839
naif1.S
M02282_2.00
Xenopus laevis
NNDRCGTAN

NTACGYHNN
PBM
Weirauch et al.(2014)
pTH9299
0.862 0.643
naif1
M02281_2.00
Xenopus tropicalis
NNNCGYANN

NNTRCGNNN
PBM
Weirauch et al.(2014)
pTH8560
0.860 0.589
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000041923 MADF 39 99

Links

Other MADF family TFs
Other Gallus gallus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.000
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.000
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.000
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.000
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.000
29900.m001628 Ricinus communis 29900.m001628 I 0.000
Cla002288 Citrullus lanatus Cla002288 I 0.000
Ca_19877 Cicer arietinum Ca_19877 I 0.000
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.000
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.000
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.000
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.000
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.000
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.000
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.000
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.000
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.000
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.000
Ca_02494 Cicer arietinum Ca_02494 N 0.000