ENSLACG00000016334 (Latimeria chalumnae)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ENSLACG00000016334 T248320_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
naif1.S
M02282_2.00
Xenopus laevis
NNDRCGTAN

NTACGYHNN
PBM
Weirauch et al.(2014)
pTH9299
0.912 0.738
naif1
M02281_2.00
Xenopus tropicalis
NNNCGYANN

NNTRCGNNN
PBM
Weirauch et al.(2014)
pTH8560
0.909 0.613
NAIF1_CHICK
M01260_2.00
Gallus gallus
NNNDRCGTAN

NTACGYHNNN
PBM
Lambert et al.(2019)
pTH9808
0.895 0.475
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000018552 MADF 23 107

Links

Other MADF family TFs
Other Latimeria chalumnae TFs

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61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action