CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Msantd3
(
Rattus norvegicus
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
ENSRNOG00000008159
T248406_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Orthologous to human MSANTD3 (Myb/SANT DNA binding domain containing 3). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MSANTD3
M01259_2.00
Homo sapiens
SBNCACTCAM
KTGAGTGNVS
PBM
Lambert et al.(2019)
pTH11241
0.971
0.963
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000011273
MADF
21
106
LLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKARTKKIMAHERREKVKRSGSPLLSTHVL
ENSRNOP00000073524
MADF
21
106
LLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKARTKKIMAHERREKVKRSGSPLLSTHVL
Links
Other
MADF
family TFs
Other
Rattus norvegicus
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy