ENSXMAG00000013359 (Xiphophorus maculatus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ENSXMAG00000013359 T248437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
naif1.S
M02282_2.00
Xenopus laevis
NNDRCGTAN

NTACGYHNN
PBM
Weirauch et al.(2014)
pTH9299
0.888 0.443
naif1
M02281_2.00
Xenopus tropicalis
NNNCGYANN

NNTRCGNNN
PBM
Weirauch et al.(2014)
pTH8560
0.886 0.418
NAIF1_CHICK
M01260_2.00
Gallus gallus
NNNDRCGTAN

NTACGYHNNN
PBM
Lambert et al.(2019)
pTH9808
0.886 0.430
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000013376 MADF 20 103

Links

Other MADF family TFs
Other Xiphophorus maculatus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.9345s0049 Boechera stricta Bostr.9345s0049 N 0.000
Bra003242 Brassica rapa Bra003242 N 0.000
Bra007248 Brassica rapa Bra007248 N 0.000
PK11742.1 Cannabis sativa PK11742.1 N 0.000
Ca_07148 Cicer arietinum Ca_07148 N 0.000
orange1.1g012725m.g Citrus sinensis orange1.1g012725m.g N 0.000
Cucsa.358510 Cucumis sativus Cucsa.358510 N 0.000
Eucgr.K01667 Eucalyptus grandis Eucgr.K01667 N 0.000
GLYMA03G27960 Glycine max GLYMA03G27960 N 0.000
Gorai.007G351800 Gossypium raimondii Gorai.007G351800 N 0.000
chr1.CM0269.160.nc Lotus japonicus chr1.CM0269.160.nc N 0.000
MTR_7g089090 Medicago truncatula MTR_7g089090 N 0.000
mgf010648m Mimulus guttatus mgf010648m N 0.000
POPTR_0006s03380 Populus trichocarpa POPTR_0006s03380 N 0.000
POPTR_0016s03290 Populus trichocarpa POPTR_0016s03290 N 0.000
Pm012305 Prunus mume Pm012305 N 0.000
PRUPE_ppa004791mg Prunus persica PRUPE_ppa004791mg N 0.000
30180.m001023 Ricinus communis 30180.m001023 N 0.000
SapurV1A.0159s0150 Salix purpurea SapurV1A.0159s0150 N 0.000
SapurV1A.0189s0010 Salix purpurea SapurV1A.0189s0010 N 0.000
SapurV1A.1916s0060 Salix purpurea SapurV1A.1916s0060 N 0.000
TCM_023871 Theobroma cacao TCM_023871 N 0.000
VIT_08s0040g00970 Vitis vinifera VIT_08s0040g00970 N 0.000