fgenesh2_kg.5__2307__AT3G58630.1 (Arabidopsis lyrata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 fgenesh2_kg.5__2307__AT3G58630.1 T249066_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G58630
M06976_2.00
Arabidopsis thaliana
HNTCGCCGGARWHDN

NHDWYTCCGGCGAND
Dap-seq
OMalley et al.(2016)
AT3G58630_col_a
0.971 0.973
AT3G58630
M06977_2.00
Arabidopsis thaliana
NNTCGCCGGARWHDN

NHDWYTCCGGCGANN
Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a
0.971 0.973
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__2307__AT3G58630.1 MADF 37 127

Links

Other MADF family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action