GLYMA11G37390 (Glycine max)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GLYMA11G37390 T249114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLYMA11G37390
M02269_2.00		 Glycine max
BWDACYNNNN
NNNNRGTHWV		 PBM
Weirauch et al.(2014)
pTH9183		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cassava13991.valid.m1
M02279_2.00 		Manihot esculenta
NNDACHNNNN
NNNNDGTHNN		 PBM
Weirauch et al.(2014)
pTH9206 		0.968 0.770
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00 		Arabidopsis lyrata
NNNHAACCCCYNN
NNRGGGGTTDNNN		 PBM
Weirauch et al.(2014)
pTH9228 		0.966 0.730
MTR_3g085960
M02270_2.00 		Medicago truncatula
NWAACYNNNN
NNNNRGTTWN		 PBM
Weirauch et al.(2014)
pTH9208 		0.956 0.797
MDP0000164819
M02280_2.00 		Malus domestica
YTAACYVNNN
NNNBRGTTAR		 PBM
Weirauch et al.(2014)
pTH9204 		0.950 0.757
29929.m004704
M02278_2.00 		Ricinus communis
NDNDHDHNHN
NDNDHDHNHN		 PBM
Weirauch et al.(2014)
pTH9339 		0.948 0.730
GT-1
M02274_2.00 		Arabidopsis lyrata
GGTTAACC
GGTTAACC		 PBM
Weirauch et al.(2014)
pTH9235 		0.944 0.568
PK20543.1
M01264_2.00 		Cannabis sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Lambert et al.(2019)
pTH11253 		0.941 0.500
GT-1
M02263_2.00 		Arabidopsis thaliana
KTTAACCM
KGGTTAAM		 PBM
Weirauch et al.(2014)
pTH8149 		0.939 0.730
GT-1
M10896_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6_02 		0.939 0.730
GT-1
M10897_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6 		0.939 0.730
GT-4
M02265_2.00 		Arabidopsis thaliana
NHDACHNNNN
NNNNDGTHDN		 PBM
Weirauch et al.(2014)
pTH7910 		0.935 0.689
GT-4
M06974_2.00 		Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH
DDWWWWRWHTTAACCATGGTT		 Dap-seq
OMalley et al.(2016)
AT3G25990_col_a 		0.935 0.689
GT-4
M06975_2.00 		Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH
DNHTAAYYWBRGTTARNKWW		 Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a 		0.935 0.689
OS04G0486400
M02273_2.00 		Oryza sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Weirauch et al.(2014)
pTH9338 		0.909 0.514
VIT_17s0000g10420
M02275_2.00 		Vitis vinifera
GTTAACYV
BRGTTAAC		 PBM
Weirauch et al.(2014)
pTH9293 		0.876 0.405
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02269_2.00 MADF 51 127

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA11G37390.2 MADF 169 245
GLYMA11G37390.3 MADF 169 245

Links

Other MADF family TFs
Other Glycine max TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I 0.971
GLYMA18G01360 Glycine max GLYMA18G01360 I 0.970
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I 0.970
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D 0.968
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I 0.968
Ca_11315 Cicer arietinum Ca_11315 I 0.968
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I 0.966
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D 0.966
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I 0.963
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I 0.963
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I 0.963
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I 0.961
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I 0.960
Lus10015824.g Linum usitatissimum Lus10015824.g I 0.959
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I 0.957
Lus10036978.g Linum usitatissimum Lus10036978.g I 0.957
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I 0.956
MTR_3g085960 Medicago truncatula MTR_3g085960 D 0.956
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I 0.956
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I 0.956
TCM_010751 Theobroma cacao TCM_010751 I 0.956
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I 0.955
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I 0.954
Cla023054 Citrullus lanatus Cla023054 I 0.954
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I 0.952
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I 0.951
MDP0000164819 Malus domestica MDP0000164819 D 0.950
Pm006885 Prunus mume Pm006885 I 0.950
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I 0.950
Cucsa.394820 Cucumis sativus Cucsa.394820 I 0.949
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I 0.949
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I 0.949
29929.m004704 Ricinus communis 29929.m004704 D 0.948
GT-1 Arabidopsis lyrata scaffold_101505.1 D 0.944
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I 0.943
PK20543.1 Cannabis sativa PK20543.1 D 0.941
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I 0.940
Carubv10017413m.g Capsella rubella Carubv10017413m.g I 0.940
Carubv10009313m.g Capsella rubella Carubv10009313m.g I 0.939
Bo8g107400 Brassica oleracea Bo8g107400 I 0.939
Bra026903 Brassica rapa Bra026903 I 0.939
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I 0.939
GT-1 Arabidopsis thaliana AT1G13450 D 0.939
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I 0.939
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I 0.938
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I 0.937
GT-4 Arabidopsis thaliana AT3G25990 D 0.935
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I 0.935
Bo5g017510 Brassica oleracea Bo5g017510 I 0.927
Bra019721 Brassica rapa Bra019721 I 0.927
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I 0.926
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I 0.926
Pm016214 Prunus mume Pm016214 I 0.924
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I 0.924
MDP0000275412 Malus domestica MDP0000275412 I 0.921
Bra036354 Brassica rapa Bra036354 I 0.918
Bo2g138840 Brassica oleracea Bo2g138840 I 0.918
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I 0.915
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I 0.914
GRMZM2G047370 Zea mays GRMZM2G047370 I 0.911
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I 0.909
OS04G0486400 Oryza sativa OS04G0486400 D 0.909
Si036121m.g Setaria italica Si036121m.g I 0.908
MLOC_64014 Hordeum vulgare MLOC_64014 I 0.904
Si010147m.g Setaria italica Si010147m.g I 0.900
mgf016368m Mimulus guttatus mgf016368m I 0.892
OB04G23970 Oryza brachyantha OB04G23970 I 0.887
VIT_17s0000g10420 Vitis vinifera VIT_17s0000g10420 D 0.876