GLYMA18G01360 (Glycine max)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GLYMA18G01360 T249129_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLYMA11G37390
M02269_2.00 		Glycine max
BWDACYNNNN
NNNNRGTHWV		 PBM
Weirauch et al.(2014)
pTH9183 		0.970 0.781
cassava13991.valid.m1
M02279_2.00 		Manihot esculenta
NNDACHNNNN
NNNNDGTHNN		 PBM
Weirauch et al.(2014)
pTH9206 		0.968 0.753
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00 		Arabidopsis lyrata
NNNHAACCCCYNN
NNRGGGGTTDNNN		 PBM
Weirauch et al.(2014)
pTH9228 		0.966 0.712
MTR_3g085960
M02270_2.00 		Medicago truncatula
NWAACYNNNN
NNNNRGTTWN		 PBM
Weirauch et al.(2014)
pTH9208 		0.954 0.822
MDP0000164819
M02280_2.00 		Malus domestica
YTAACYVNNN
NNNBRGTTAR		 PBM
Weirauch et al.(2014)
pTH9204 		0.950 0.753
29929.m004704
M02278_2.00 		Ricinus communis
NDNDHDHNHN
NDNDHDHNHN		 PBM
Weirauch et al.(2014)
pTH9339 		0.948 0.712
GT-1
M02274_2.00 		Arabidopsis lyrata
GGTTAACC
GGTTAACC		 PBM
Weirauch et al.(2014)
pTH9235 		0.944 0.589
PK20543.1
M01264_2.00 		Cannabis sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Lambert et al.(2019)
pTH11253 		0.941 0.507
GT-1
M02263_2.00 		Arabidopsis thaliana
KTTAACCM
KGGTTAAM		 PBM
Weirauch et al.(2014)
pTH8149 		0.938 0.562
GT-1
M10896_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6_02 		0.938 0.562
GT-1
M10897_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6 		0.938 0.562
GT-4
M02265_2.00 		Arabidopsis thaliana
NHDACHNNNN
NNNNDGTHDN		 PBM
Weirauch et al.(2014)
pTH7910 		0.935 0.671
GT-4
M06974_2.00 		Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH
DDWWWWRWHTTAACCATGGTT		 Dap-seq
OMalley et al.(2016)
AT3G25990_col_a 		0.935 0.671
GT-4
M06975_2.00 		Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH
DNHTAAYYWBRGTTARNKWW		 Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a 		0.935 0.671
OS04G0486400
M02273_2.00 		Oryza sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Weirauch et al.(2014)
pTH9338 		0.907 0.479
VIT_17s0000g10420
M02275_2.00 		Vitis vinifera
GTTAACYV
BRGTTAAC		 PBM
Weirauch et al.(2014)
pTH9293 		0.880 0.466
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G01360.1 MADF 74 151

Links

Other MADF family TFs
Other Glycine max TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA11G37390 Glycine max GLYMA11G37390 D 0.970
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I 0.970
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I 0.970
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D 0.968
Ca_11315 Cicer arietinum Ca_11315 I 0.968
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I 0.968
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D 0.966
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I 0.966
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I 0.963
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I 0.963
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I 0.963
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I 0.961
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I 0.960
Lus10015824.g Linum usitatissimum Lus10015824.g I 0.959
Lus10036978.g Linum usitatissimum Lus10036978.g I 0.957
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I 0.956
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I 0.956
TCM_010751 Theobroma cacao TCM_010751 I 0.956
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I 0.955
Cla023054 Citrullus lanatus Cla023054 I 0.954
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I 0.954
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I 0.954
MTR_3g085960 Medicago truncatula MTR_3g085960 D 0.954
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I 0.952
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I 0.952
MDP0000164819 Malus domestica MDP0000164819 D 0.950
Pm006885 Prunus mume Pm006885 I 0.950
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I 0.950
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I 0.950
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I 0.949
Cucsa.394820 Cucumis sativus Cucsa.394820 I 0.949
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I 0.949
29929.m004704 Ricinus communis 29929.m004704 D 0.948
GT-1 Arabidopsis lyrata scaffold_101505.1 D 0.944
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I 0.943
PK20543.1 Cannabis sativa PK20543.1 D 0.941
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I 0.940
Carubv10017413m.g Capsella rubella Carubv10017413m.g I 0.940
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I 0.940
Carubv10009313m.g Capsella rubella Carubv10009313m.g I 0.939
Bra026903 Brassica rapa Bra026903 I 0.939
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I 0.939
Bo8g107400 Brassica oleracea Bo8g107400 I 0.939
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I 0.939
GT-1 Arabidopsis thaliana AT1G13450 D 0.938
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I 0.938
GT-4 Arabidopsis thaliana AT3G25990 D 0.935
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I 0.935
Bra019721 Brassica rapa Bra019721 I 0.927
Bo5g017510 Brassica oleracea Bo5g017510 I 0.927
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I 0.926
Pm016214 Prunus mume Pm016214 I 0.924
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I 0.924
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I 0.924
MDP0000275412 Malus domestica MDP0000275412 I 0.921
Bra036354 Brassica rapa Bra036354 I 0.921
Bo2g138840 Brassica oleracea Bo2g138840 I 0.918
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I 0.914
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I 0.914
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I 0.907
GRMZM2G047370 Zea mays GRMZM2G047370 I 0.907
OS04G0486400 Oryza sativa OS04G0486400 D 0.907
Si036121m.g Setaria italica Si036121m.g I 0.906
MLOC_64014 Hordeum vulgare MLOC_64014 I 0.904
Si010147m.g Setaria italica Si010147m.g I 0.898
mgf016368m Mimulus guttatus mgf016368m I 0.890
OB04G23970 Oryza brachyantha OB04G23970 I 0.885
VIT_17s0000g10420 Vitis vinifera VIT_17s0000g10420 D 0.880