CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G375307
(
Zea mays
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
GRMZM2G375307
T249146_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G375307_P01
MADF
41
127
LRNRAKLKWSDWVDIAREVSVHCADDAAAAGKPPGHGGGSSAKTPNQCKNKIESMKKRYRAEAAAAARAGPAAAGPTWRFFARMDGL
GRMZM2G375307_P02
MADF
36
127
EAKWLLRNRAKLKWSDWVDIAREVSVHCADDAAAAGKPPGHGGGSSAKTPNQCKNKIESMKKRYRAEAAAAARAGPAAAGPTWRFFARMDGL
Links
Other
MADF
family TFs
Other
Zea mays
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb02g032600
Sorghum bicolor
Sb02g032600
N
0.965
OPUNC09G17780
Oryza punctata
OPUNC09G17780
N
0.937
ORUFI09G20970
Oryza rufipogon
ORUFI09G20970
N
0.937
OS09G0558200
Oryza sativa
OS09G0558200
N
0.937
Pavir.Bb02591
Panicum virgatum
Pavir.Bb02591
N
0.937
Si030430m.g
Setaria italica
Si030430m.g
N
0.936
Pavir.Ba01421
Panicum virgatum
Pavir.Ba01421
N
0.936
ORGLA09G0156000
Oryza glaberrima
ORGLA09G0156000
N
0.899
ONIVA09G20540
Oryza nivara
ONIVA09G20540
N
0.899
LPERR09G15280
Leersia perrieri
LPERR09G15280
N
0.899
BGIOSGA031252
Oryza indica
BGIOSGA031252
N
0.899
OBART09G19410
Oryza barthii
OBART09G19410
N
0.899
OMERI09G14610
Oryza meridionalis
OMERI09G14610
N
0.899
OGLUM09G20110
Oryza glumaepatula
OGLUM09G20110
N
0.899
BRADI4G37730
Brachypodium distachyon
BRADI4G37730
N
0.883
OB09G26010
Oryza brachyantha
OB09G26010
N
0.849