GSMUA_Achr1G24120_001 (Musa acuminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GSMUA_Achr1G24120_001 T249158_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.921 0.836
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.921 0.836
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.832 0.687
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P24120_001 MADF 484 553

Links

Other MADF family TFs
Other Musa acuminata TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.956
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.942
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.942
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.940
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.929
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.929
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.929
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.929
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.924
OB02G10400 Oryza brachyantha OB02G10400 I 0.924
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.921
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.921
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.921
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.921
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.921
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.921
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.921
OBART02G00380 Oryza barthii OBART02G00380 I 0.921
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.921
OS02G0104500 Oryza sativa OS02G0104500 D 0.921
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.920
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.915
TCM_037381 Theobroma cacao TCM_037381 I 0.913
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.911
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.911
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.911
Si033157m.g Setaria italica Si033157m.g I 0.907
29739.m003611 Ricinus communis 29739.m003611 I 0.903
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.903
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.902
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.901
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.901
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.901
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.901
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.901
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.901
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.900
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.882
Gorai.001G020300 Gossypium raimondii Gorai.001G020300 I 0.881
AMTR_s00001p00251940 Amborella trichopoda AMTR_s00001p00251940 I 0.873
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.871
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.863
MDP0000122269 Malus domestica MDP0000122269 I 0.862
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.862
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.860
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.860
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.859
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.859
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.849
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.849
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.848
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.847
GSMUA_AchrUn_randomG04130_001 Musa acuminata GSMUA_AchrUn_randomG04130_001 N 0.846
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.844
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.844
Bo6g083670 Brassica oleracea Bo6g083670 I 0.839
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.838
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.838
PK14727.1 Cannabis sativa PK14727.1 I 0.837
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.833
PK15172.1 Cannabis sativa PK15172.1 D 0.832
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.820
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.819
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.818
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.814