GSMUA_Achr1G27460_001 (Musa acuminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GSMUA_Achr1G27460_001 T249159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.901 0.700
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.901 0.700
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.853 0.629
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P27460_001 MADF 34 111

Links

Other MADF family TFs
Other Musa acuminata TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.966
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.965
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.938
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.913
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.913
Si022565m.g Setaria italica Si022565m.g I 0.913
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.913
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.912
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.912
OS05G0560600 Oryza sativa OS05G0560600 I 0.912
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.912
OBART05G25610 Oryza barthii OBART05G25610 I 0.912
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.912
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.912
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.912
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.912
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.912
Cla002288 Citrullus lanatus Cla002288 I 0.910
mgf006505m Mimulus guttatus mgf006505m I 0.908
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.905
Ca_19877 Cicer arietinum Ca_19877 I 0.905
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.904
Bo6g075950 Brassica oleracea Bo6g075950 I 0.904
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.903
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.902
Bra003346 Brassica rapa Bra003346 I 0.902
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.901
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.901
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.901
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.901
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.901
MDP0000301451 Malus domestica MDP0000301451 I 0.901
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.898
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.895
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.895
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.892
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.890
29900.m001628 Ricinus communis 29900.m001628 I 0.888
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.888
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.887
Cucsa.195790 Cucumis sativus Cucsa.195790 N 0.887
PK27986.1 Cannabis sativa PK27986.1 I 0.884
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.879
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.875
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.873
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.872
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.871
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.871
Bra007407 Brassica rapa Bra007407 I 0.870
mgf000047m Mimulus guttatus mgf000047m I 0.868
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.867
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.867
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.866
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.865
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.864
Cla019967 Citrullus lanatus Cla019967 I 0.860
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.860
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.860
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.855
Ca_00394 Cicer arietinum Ca_00394 I 0.854
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.854
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.854
TCM_029695 Theobroma cacao TCM_029695 I 0.854
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.853
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.853
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.853
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.853
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.853
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.853
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.853
ASIL2 Arabidopsis thaliana AT3G14180 D 0.853
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.853
TCM_042467 Theobroma cacao TCM_042467 N 0.852
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.851
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.851
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.850
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.849
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.848
29814.m000741 Ricinus communis 29814.m000741 I 0.848
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.847
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.847
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.847
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.842
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.842
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.838
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.838
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.837
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.833
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.833
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.833
OS01G0674000 Oryza sativa OS01G0674000 N 0.833
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.833
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N 0.833
PGSC0003DMG400010197 Solanum tuberosum PGSC0003DMG400010197 I 0.829
Solyc02g076810.2 Solanum lycopersicum Solyc02g076810.2 I 0.829
Cla009854 Citrullus lanatus Cla009854 I 0.828
Carubv10014421m.g Capsella rubella Carubv10014421m.g I 0.828
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.828
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.826
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.826
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.826
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.826
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.826
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.825
mgf001239m Mimulus guttatus mgf001239m N 0.820
SELMODRAFT_68041 Selaginella moellendorffii SELMODRAFT_68041 I 0.818
SELMODRAFT_68039 Selaginella moellendorffii SELMODRAFT_68039 I 0.818
SapurV1A.0045s0480 Salix purpurea SapurV1A.0045s0480 I 0.815
MDP0000097759 Malus domestica MDP0000097759 N 0.814