NAIF1_CHICK (Gallus gallus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 NAIF1_CHICK T249469_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAIF1_CHICK
M01260_2.00		 Gallus gallus
NNNDRCGTAN
NTACGYHNNN		 PBM
Lambert et al.(2019)
pTH9808		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
naif1
M02281_2.00 		Xenopus tropicalis
NNNCGYANN
NNTRCGNNN		 PBM
Weirauch et al.(2014)
pTH8560 		0.860 0.635
naif1.S
M02282_2.00 		Xenopus laevis
NNDRCGTAN
NTACGYHNN		 PBM
Weirauch et al.(2014)
pTH9299 		0.860 0.635
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01260_2.00 MADF 42 104

DNA Binding Domains

Protein ID Domain From To Sequence
NAIF1_CHICK MADF 42 104

Links

Other MADF family TFs
Other Gallus gallus TFs

Invalid Input OrderBy

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action