OB02G10400 (Oryza brachyantha)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OB02G10400 T249524_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0104500
M02271_2.00
Oryza sativa
NDGTAAWWHN

NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH8719
0.965 0.970
OS02G0104500
M02272_2.00
Oryza sativa
NDGTAAWWHN

NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH9273
0.965 0.970
PK15172.1
M01263_2.00
Cannabis sativa
NNNGTWAHWN

NWDTWACNNN
PBM
Lambert et al.(2019)
pTH10125
0.878 0.716
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB02G10400.1 MADF 168 237

Links

Other MADF family TFs
Other Oryza brachyantha TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.968
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.965
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.965
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.965
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.965
OBART02G00380 Oryza barthii OBART02G00380 I 0.965
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.965
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.965
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.965
OS02G0104500 Oryza sativa OS02G0104500 D 0.965
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.961
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.961
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.961
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.961
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.956
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.950
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.950
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.950
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.946
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.946
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.946
Si033157m.g Setaria italica Si033157m.g I 0.944
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.940
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.940
29739.m003611 Ricinus communis 29739.m003611 I 0.940
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.939
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.934
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.933
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.933
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.933
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.933
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.932
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.924
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.923
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.920
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.914
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.913
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.913
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.908
MDP0000122269 Malus domestica MDP0000122269 I 0.908
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.908
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.906
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.905
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.905
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.904
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.902
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.902
TCM_037381 Theobroma cacao TCM_037381 I 0.899
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.898
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.898
PK14727.1 Cannabis sativa PK14727.1 I 0.897
Bo6g083670 Brassica oleracea Bo6g083670 I 0.891
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.879
PK15172.1 Cannabis sativa PK15172.1 D 0.878
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.869
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.868
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.868
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.866
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.864
Gorai.001G020300 Gossypium raimondii Gorai.001G020300 I 0.862
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.861
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.861
Pavir.J25029 Panicum virgatum Pavir.J25029 I 0.854
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I 0.846
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.845
AMTR_s00001p00251940 Amborella trichopoda AMTR_s00001p00251940 I 0.842
Traes_1DL_9EFDBD741 Triticum aestivum Traes_1DL_9EFDBD741 I 0.837
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.831
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.831
OBART10G15720 Oryza barthii OBART10G15720 I 0.830
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.818