CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART10G15720
(
Oryza barthii
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
OBART10G15720
T249538_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK26075.1
M01265_2.00
Cannabis sativa
NNRGTDANWN
NWNTHACYNN
PBM
Lambert et al.(2019)
pTH11260
0.916
0.841
OS02G0104500
M02271_2.00
Oryza sativa
NDGTAAWWHN
NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH8719
0.824
0.478
OS02G0104500
M02272_2.00
Oryza sativa
NDGTAAWWHN
NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH9273
0.824
0.478
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART10G15720.1
MADF
109
180
SDMDSAFRDATLKGPLWEEVSRKLAEEGYRRSAKKCKEKFENVHKYYKRTKESRAGRNDGKTYRFFTQLEAL
Links
Other
MADF
family TFs
Other
Oryza barthii
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy