ONIVA10G17310 (Oryza nivara)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ONIVA10G17310 T249575_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.901 0.775
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.901 0.775
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA10G17310.1 MADF 186 257
ONIVA10G17310.1 MADF 562 635
ONIVA10G17310.2 MADF 200 271
ONIVA10G17310.2 MADF 576 649

Links

Other MADF family TFs
Other Oryza nivara TFs

Invalid Input OrderBy

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action