ONIVA10G17310 (Oryza nivara)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ONIVA10G17310 T249575_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.901 0.775
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.901 0.775
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA10G17310.1 MADF 186 257
ONIVA10G17310.1 MADF 562 635
ONIVA10G17310.2 MADF 200 271
ONIVA10G17310.2 MADF 576 649

Links

Other MADF family TFs
Other Oryza nivara TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_26780 Aegilops tauschii F775_26780 N 0.000
F775_08653 Aegilops tauschii F775_08653 N 0.000
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.000
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.000
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N 0.000
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.000
Bo9g009240 Brassica oleracea Bo9g009240 N 0.000
PK09018.1 Cannabis sativa PK09018.1 N 0.000
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.000
Ca_09786 Cicer arietinum Ca_09786 N 0.000
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.000
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.000
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.000
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.000
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.000
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.000
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.000
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.000
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.000
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.000
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.000
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.000
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.000
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.000
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.000
MDP0000152670 Malus domestica MDP0000152670 N 0.000
MDP0000804652 Malus domestica MDP0000804652 N 0.000
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.000
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.000
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.000
OBART10G07700 Oryza barthii OBART10G07700 N 0.000
OBART03G06740 Oryza barthii OBART03G06740 N 0.000
OB03G16920 Oryza brachyantha OB03G16920 N 0.000
OB10G15940 Oryza brachyantha OB10G15940 N 0.000
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.000
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.000
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.000
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.000
BGIOSGA012030 Oryza indica BGIOSGA012030 N 0.000
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.000
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.000
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.000
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.000
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.000
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.000
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.000
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.000
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.000
OS03G0193000 Oryza sativa OS03G0193000 N 0.000
CIGR2 Oryza sativa OS07G0583600 N 0.000
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.000
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.000
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.000
Pavir.Ib02999 Panicum virgatum Pavir.Ib02999 N 0.000
Pavir.Ib00589 Panicum virgatum Pavir.Ib00589 N 0.000
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.000
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.000
Pm015021 Prunus mume Pm015021 N 0.000
Pm012019 Prunus mume Pm012019 N 0.000
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.000
29949.m000124 Ricinus communis 29949.m000124 N 0.000
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.000
Si035089m.g Setaria italica Si035089m.g N 0.000
Si035052m.g Setaria italica Si035052m.g N 0.000
Si029418m.g Setaria italica Si029418m.g N 0.000
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.000
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.000
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.000
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.000
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.000
TCM_002319 Theobroma cacao TCM_002319 N 0.000
Traes_4AS_C30034054 Triticum aestivum Traes_4AS_C30034054 N 0.000
Traes_4DL_E50C77AEC Triticum aestivum Traes_4DL_E50C77AEC N 0.000
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.000
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.000
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.000
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.000
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.000
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.000
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.000
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.000
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.000
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.000
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.000
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.000
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.000
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.000
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.000
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.000
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.000