OS02G0104500 (Oryza sativa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OS02G0104500 T249609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0104500
M02271_2.00		 Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719		 (Direct) (Direct)
OS02G0104500
M02272_2.00		 Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.873 0.716
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02271_2.00 MADF 52 121
M02272_2.00 MADF 51 120

DNA Binding Domains

Protein ID Domain From To Sequence
OS02T0104500-01 MADF 311 380

Links

Other MADF family TFs
Other Oryza sativa TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.971
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.971
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.971
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.971
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.971
OBART02G00380 Oryza barthii OBART02G00380 I 0.971
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.971
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.971
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.969
OB02G10400 Oryza brachyantha OB02G10400 I 0.965
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.964
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.960
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.960
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.960
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.960
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.950
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.949
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.949
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.948
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.948
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.948
29739.m003611 Ricinus communis 29739.m003611 I 0.944
Si033157m.g Setaria italica Si033157m.g I 0.942
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.939
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.937
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.937
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.937
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.931
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.930
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.930
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.930
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.929
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.921
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.921
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.920
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.910
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.906
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.906
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.905
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.904
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.898
MDP0000122269 Malus domestica MDP0000122269 I 0.897
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.897
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.896
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.896
TCM_037381 Theobroma cacao TCM_037381 I 0.895
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.887
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.887
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.886
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.885
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.879
Bo6g083670 Brassica oleracea Bo6g083670 I 0.879
PK14727.1 Cannabis sativa PK14727.1 I 0.878
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.878
PK15172.1 Cannabis sativa PK15172.1 D 0.873
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.870
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I 0.870
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.864
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.863
Traes_1DL_9EFDBD741 Triticum aestivum Traes_1DL_9EFDBD741 I 0.863
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.863
Gorai.001G020300 Gossypium raimondii Gorai.001G020300 I 0.857
Pavir.J25029 Panicum virgatum Pavir.J25029 I 0.849
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.846
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.841
AMTR_s00001p00251940 Amborella trichopoda AMTR_s00001p00251940 I 0.837
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.836
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.835
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.826
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.826
OBART10G15720 Oryza barthii OBART10G15720 I 0.824