POPTR_0001s06580 (Populus trichocarpa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 POPTR_0001s06580 T249655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s06580.1 MADF 66 142

Links

Other MADF family TFs
Other Populus trichocarpa TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa007968mg Prunus persica PRUPE_ppa007968mg N 0.971
SapurV1A.0574s0200 Salix purpurea SapurV1A.0574s0200 N 0.971
cassava22232.valid.m1 Manihot esculenta cassava22232.valid.m1 N 0.967
GLYMA13G26550 Glycine max GLYMA13G26550 N 0.965
Bostr.0697s0050 Boechera stricta Bostr.0697s0050 N 0.964
fgenesh2_kg.5__1832__AT3G54390.1 Arabidopsis lyrata fgenesh2_kg.5__1832__AT3G54390.1 N 0.964
Cagra.0562s0030 Capsella grandiflora Cagra.0562s0030 N 0.964
Carubv10019255m.g Capsella rubella Carubv10019255m.g N 0.964
Bra007069 Brassica rapa Bra007069 N 0.963
Pm016744 Prunus mume Pm016744 N 0.962
VIT_13s0084g00800 Vitis vinifera VIT_13s0084g00800 N 0.961
POPTR_0003s19470 Populus trichocarpa POPTR_0003s19470 N 0.961
SapurV1A.0009s1160 Salix purpurea SapurV1A.0009s1160 N 0.960
Cla010096 Citrullus lanatus Cla010096 N 0.953
AT3G54390 Arabidopsis thaliana AT3G54390 N 0.952
Bo8g083630 Brassica oleracea Bo8g083630 N 0.952
Bo8g068640 Brassica oleracea Bo8g068640 N 0.951
MDP0000123719 Malus domestica MDP0000123719 N 0.950
MDP0000727700 Malus domestica MDP0000727700 N 0.950
LjSGA_030847.2 Lotus japonicus LjSGA_030847.2 N 0.947
Solyc01g096470.2 Solanum lycopersicum Solyc01g096470.2 N 0.947
GLYMA11G25570 Glycine max GLYMA11G25570 N 0.941
Aquca_004_00804 Aquilegia coerulea Aquca_004_00804 N 0.931
Ciclev10001759m.g Citrus clementina Ciclev10001759m.g N 0.927
GLYMA15G37451 Glycine max GLYMA15G37451 N 0.927