POPTR_0001s18000 (Populus trichocarpa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 POPTR_0001s18000 T249658_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s18000.1 MADF 155 229

Links

Other MADF family TFs
Other Populus trichocarpa TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N 0.968
SapurV1A.3798s0010 Salix purpurea SapurV1A.3798s0010 N 0.968
POPTR_0003s05470 Populus trichocarpa POPTR_0003s05470 N 0.933
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N 0.917
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N 0.914
Pm013502 Prunus mume Pm013502 N 0.914
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N 0.912
MDP0000276691 Malus domestica MDP0000276691 N 0.911
mgf024433m Mimulus guttatus mgf024433m N 0.897
Cucsa.358990 Cucumis sativus Cucsa.358990 N 0.897
Cla015679 Citrullus lanatus Cla015679 N 0.897
gene05956-v1.0-hybrid Fragaria vesca gene05956-v1.0-hybrid N 0.888
MTR_2g102227 Medicago truncatula MTR_2g102227 N 0.866
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N 0.859
VIT_11s0016g04130 Vitis vinifera VIT_11s0016g04130 N 0.858
PK03816.1 Cannabis sativa PK03816.1 N 0.844
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N 0.843
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N 0.839
GLYMA15G01730 Glycine max GLYMA15G01730 N 0.839
29872.m000548 Ricinus communis 29872.m000548 N 0.836
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N 0.831
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N 0.826
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N 0.825
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N 0.823
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N 0.823
cassava1476.valid.m1 Manihot esculenta cassava1476.valid.m1 N 0.819
MDP0000500940 Malus domestica MDP0000500940 N 0.818
Pm027397 Prunus mume Pm027397 N 0.815