PRUPE_ppa009171mg (Prunus persica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 PRUPE_ppa009171mg T249711_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G58630
M06976_2.00
Arabidopsis thaliana
HNTCGCCGGARWHDN

NHDWYTCCGGCGAND
Dap-seq
OMalley et al.(2016)
AT3G58630_col_a
0.883 0.699
AT3G58630
M06977_2.00
Arabidopsis thaliana
NNTCGCCGGARWHDN

NHDWYTCCGGCGANN
Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a
0.883 0.699
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ16940 MADF 40 123

Links

Other MADF family TFs
Other Prunus persica TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.883
Cla002288 Citrullus lanatus Cla002288 I 0.848
Cla009854 Citrullus lanatus Cla009854 I 0.905
Cla019967 Citrullus lanatus Cla019967 I 0.828
29814.m000741 Ricinus communis 29814.m000741 I 0.825
29900.m001628 Ricinus communis 29900.m001628 I 0.896
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.896
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.896
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.828
Ca_00394 Cicer arietinum Ca_00394 I 0.914
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.934
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.901
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.899
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.878
SELMODRAFT_68039 Selaginella moellendorffii SELMODRAFT_68039 I 0.821
SELMODRAFT_68041 Selaginella moellendorffii SELMODRAFT_68041 I 0.821
Si022565m.g Setaria italica Si022565m.g I 0.878
Solyc02g076810.2 Solanum lycopersicum Solyc02g076810.2 I 0.815
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.910
TCM_029695 Theobroma cacao TCM_029695 I 0.913
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.828
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.891
MDP0000301451 Malus domestica MDP0000301451 I 0.906
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.913
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.878
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.878
SapurV1A.0045s0480 Salix purpurea SapurV1A.0045s0480 I 0.834
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.892
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.823
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.883
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.867
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.867
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.883
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.871
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.871
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.913
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.922
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.926
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.911
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.913
PK27986.1 Cannabis sativa PK27986.1 I 0.890
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.823
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.868
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.832
OBART05G25610 Oryza barthii OBART05G25610 I 0.890
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.883
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.865
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.889
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.881
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.931
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.838
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.850
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.882
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.878
Bra003346 Brassica rapa Bra003346 I 0.882
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.914
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.881
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.888
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.890
Bra007407 Brassica rapa Bra007407 I 0.832
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.908
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.927
OS05G0560600 Oryza sativa OS05G0560600 I 0.890
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.890
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.890
Ca_19877 Cicer arietinum Ca_19877 I 0.895
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.914
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.878
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.890
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.890
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.890
Bo6g075950 Brassica oleracea Bo6g075950 I 0.882
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.890
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.841
mgf001239m Mimulus guttatus mgf001239m N 0.832
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.867
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.827
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.849
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.841
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.827
Ca_02494 Cicer arietinum Ca_02494 N 0.822
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.827
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.827
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.827
Cucsa.195790 Cucumis sativus Cucsa.195790 N 0.814
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.827
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N 0.827
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.841
OS01G0674000 Oryza sativa OS01G0674000 N 0.827