Sb04g000520 (Sorghum bicolor)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Sb04g000520 T249769_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0104500
M02271_2.00
Oryza sativa
NDGTAAWWHN

NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH8719
0.960 0.969
OS02G0104500
M02272_2.00
Oryza sativa
NDGTAAWWHN

NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH9273
0.960 0.969
PK15172.1
M01263_2.00
Cannabis sativa
NNNGTWAHWN

NWDTWACNNN
PBM
Lambert et al.(2019)
pTH10125
0.886 0.738
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb04g000520.1 MADF 574 641

Links

Other MADF family TFs
Other Sorghum bicolor TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0000255501 Angiostrongylus costaricensis ACOC_0000255501 N 0.000
ANCCAN_05253 Ancylostoma caninum ANCCAN_05253 N 0.000
ANCCEY_12750 Ancylostoma ceylanicum ANCCEY_12750 N 0.000
DICVIV_07279 Dictyocaulus viviparus DICVIV_07279 N 0.000
HCOI01335400 Haemonchus contortus HCOI01335400 N 0.000
HPBE_0001112201 Heligmosomoides bakeri HPBE_0001112201 N 0.000
HPLM_0000327901 Haemonchus placei HPLM_0000327901 N 0.000