SELMODRAFT_24518 (Selaginella moellendorffii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 SELMODRAFT_24518 T249794_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK15172.1
M01263_2.00
Cannabis sativa
NNNGTWAHWN

NWDTWACNNN
PBM
Lambert et al.(2019)
pTH10125
0.848 0.657
OS02G0104500
M02271_2.00
Oryza sativa
NDGTAAWWHN

NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH8719
0.826 0.642
OS02G0104500
M02272_2.00
Oryza sativa
NDGTAAWWHN

NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH9273
0.826 0.642
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ32515 MADF 141 210

Links

Other MADF family TFs
Other Selaginella moellendorffii TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00001p00251940 Amborella trichopoda AMTR_s00001p00251940 I 0.827
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.866
Bo6g083670 Brassica oleracea Bo6g083670 I 0.824
PK14727.1 Cannabis sativa PK14727.1 I 0.857
PK15172.1 Cannabis sativa PK15172.1 D 0.848
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.857
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.859
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.859
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.846
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.886
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.824
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.828
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.853
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.889
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.824
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.814
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.832
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.856
MDP0000122269 Malus domestica MDP0000122269 I 0.878
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.835
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.859
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.843
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.859
OBART02G00380 Oryza barthii OBART02G00380 I 0.826
OB02G10400 Oryza brachyantha OB02G10400 I 0.831
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.876
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.826
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.826
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.826
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.882
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.826
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.826
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.826
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.826
OS02G0104500 Oryza sativa OS02G0104500 D 0.826
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.868
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.848
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.842
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.842
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.827
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.827
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.826
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.827
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.827
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.827
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.971
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.842
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.878
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.853
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.824
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.889
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.874
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.842
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.825